› 6m5t

Electron Microscopy
3.6Å resolution

The coordinate of the nuclease domain of the apo terminase complex

Released:
DOI: 10.2210/pdb6m5t/pdb
PDB entry 6m5t coloured by chain, front view.
PDB entry 6m5t coloured by chain, side view.
PDB entry 6m5t coloured by chain, top view.
Source organism: Human alphaherpesvirus 1 strain 17
Primary publication:
Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation.
Yang Y, Yang P, Wang N, Chen Z, Su D, Zhou ZH, Rao Z, Wang X
OpenAccess logo Protein Cell 11 339-351 (2020)
PMID: 32328903
Related structures: EMD-30092

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-137583 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Tripartite terminase subunit 3 Chain: A
Molecule details ›
Chain: A
Length: 286 amino acids
Theoretical weight: 30.92 KDa
Source organism: Human alphaherpesvirus 1 strain 17
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P04295 (Residues: 471-735; Coverage: 36%)
Gene names: TRM3, UL15
Sequence domains: Probable DNA packing protein, C-terminus

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.6Å
Relevant EMDB volumes: EMD-30092
Expression system: Spodoptera frugiperda

Quick links

Citations

7 review citations

Phase separation in genome organization across evolution.
Feric et al. (2021)
6 more