› 6nm5

Electron Microscopy
6.2Å resolution

F-pilus/MS2 Maturation protein complex

Released:
DOI: 10.2210/pdb6nm5/pdb
PDB entry 6nm5 coloured by chain, front view.
PDB entry 6nm5 coloured by chain, side view.
PDB entry 6nm5 coloured by chain, top view.
Source organisms:
Primary publication:
Structural basis for the adsorption of a single-stranded RNA bacteriophage.
Meng R, Jiang M, Cui Z, Chang JY, Yang K, Jakana J, Yu X, Wang Z, Hu B, Zhang J
OpenAccess logo Nat Commun 10 3130 (2019)
PMID: 31311931
Related structures: EMD-9397

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 76-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-137134 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Type IV conjugative transfer system pilin TraA Chains: 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1H, 1I, 1J, 1K, 1L, 1M, 1N, 1O, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2H, 2I, 2J, 2K, 2L, 2M, 2N, 2O, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3H, 3I, 3J, 3K, 3L, 3M, 3N, 3O, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4H, 4I, 4J, 4K, 4L, 4M, 4N, 4O, 5A, 5B, 5C, 5D, 5E, 5F, 5G, 5H, 5I, 5J, 5K, 5L, 5M, 5N, 5O
Molecule details ›
Chains: 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1H, 1I, 1J, 1K, 1L, 1M, 1N, 1O, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2H, 2I, 2J, 2K, 2L, 2M, 2N, 2O, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3H, 3I, 3J, 3K, 3L, 3M, 3N, 3O, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4H, 4I, 4J, 4K, 4L, 4M, 4N, 4O, 5A, 5B, 5C, 5D, 5E, 5F, 5G, 5H, 5I, 5J, 5K, 5L, 5M, 5N, 5O
Length: 65 amino acids
Theoretical weight: 6.83 KDa
Source organism: Escherichia coli
Maturation protein A Chain: M
Molecule details ›
Chain: M
Length: 393 amino acids
Theoretical weight: 44.03 KDa
Source organism: Emesvirus zinderi
UniProt:
  • Canonical: P03610 (Residues: 1-393; Coverage: 100%)
Gene name: A
Sequence domains: Phage maturation protein

Ligands and Environments

1 bound ligand:
Ligand KSV 70 x KSV
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 6.2Å
Relevant EMDB volumes: EMD-9397

Quick links

Citations

2 review citations

Type IV secretion systems: Advances in structure, function, and activation.
Costa et al. (2021)
1 more

1 mention without citation

Recent Advances in Structural Studies of Single-Stranded RNA Bacteriophages.
Thongchol et al. (2023)