PDB 6nqd structure summary ‹ Protein Data Bank in Europe (PDBe)

Function and Biology Details

Biochemical function:

structural molecule activity

Biological process:

not assigned

Cellular component:

viral envelope

Sequence domains:

2 more domains

Structure analysis Details

Assembly composition:

hetero dodecamer (preferred)

PDBe Complex ID:

PDB-CPX-278948 (preferred)

Entry contents:

4 distinct polypeptide molecules

Macromolecules (9 distinct):

Envelope glycoprotein gp160 Chains: A, E, I

Molecule details ›

Chains: A, E, I
Length: 486 amino acids
Theoretical weight: 54.74 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: A0A140EMT3 (Residues: 29-508; Coverage: 56%)

Gene name: env
Sequence domains: Envelope glycoprotein GP120

Transmembrane protein gp41 Chains: B, F, J

Molecule details ›

Chains: B, F, J
Length: 184 amino acids
Theoretical weight: 20.33 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: A0A140EMT3 (Residues: 513-665; Coverage: 18%)

Gene name: env
Sequence domains: Retroviral envelope protein

Ig-like domain-containing protein Chains: C, G, K

Molecule details ›

Chains: C, G, K
Length: 244 amino acids
Theoretical weight: 26.15 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:

Canonical: S6B2A6 (Residues: 20-45, 46-91, 92-121, 122-124, 125-251; Coverage: 82%)

Sequence domains:

Structure domains: Immunoglobulins

Immunoglobulin kappa light chain Chains: D, H, L

Molecule details ›

Chains: D, H, L
Length: 215 amino acids
Theoretical weight: 23.46 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt: