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1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE

LHG model coordinates provided in the wwPDB chemical component dictionary
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE in PDB entry 6nt3, assembly 1, side view.
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE in PDB entry 6nt3, assembly 1, top view.
Formula: C38 H75 O10 P
Molecular weight: 723 Da

Environment details NEW

LHG 1619 bound to chain A
Ligands and residuesInteractions
 hydrophobic
negatively charged
aromatic
polar
cystein
water
positively charged
other
glycine
bound molecule
glycans (SNFG)
aromatic
clashes
covalent
electrostatic
metal hydrophobic
vdw
PHE229TRP235VAL248LEU251ILE255LEU651ILE654PHE655ILE658VAL727

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The above 2D and 3D (Mol*) views of ligand interactions use quaternary structure derived from the PDB entry.
Please note:
  • Some chain IDs in the tooltip are followed by a number in square brackets. This number corresponds to the operation ID (mmCIF ‘oper_expression’) used to transform the chain.
  • The structure seen in Mol* (3D view) was protonated using ChimeraX.
  • Interactions were calculated using Arpeggio (see details for interaction types).
  • The colour scheme used is consistent with Clustal X.

Quick links

EBI resources (LHG)

External mappings