6qpg

X-ray diffraction
3.34Å resolution

Influenza A virus Polymerase Heterotrimer A/nt/60/1968(H3N2) in complex with Nanobody NB8205

Released:
Model geometry
Fit model/data

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-208940 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (4 distinct):
Polymerase acidic protein Chains: A, D, G, J
Molecule details ›
Chains: A, D, G, J
Length: 716 amino acids
Theoretical weight: 83.1 KDa
Source organism: Influenza A virus (A/nt/60/1968(H3N2))
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P03434 (Residues: 1-716; Coverage: 100%)
Gene name: PA
Sequence domains: Influenza RNA-dependent RNA polymerase subunit PA
RNA-directed RNA polymerase catalytic subunit Chains: B, E, H, K
Molecule details ›
Chains: B, E, H, K
Length: 757 amino acids
Theoretical weight: 86.52 KDa
Source organism: Influenza A virus (A/nt/60/1968(H3N2))
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P03432 (Residues: 1-757; Coverage: 100%)
Gene name: PB1
Sequence domains: Influenza RNA-dependent RNA polymerase subunit PB1
Polymerase basic protein 2 Chains: C, F, I, L
Nanobody NB8205 Chains: M, N, O, P

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: DIAMOND BEAMLINE I04
Spacegroup: C2
Unit cell:
a: 335.181Å b: 192.9Å c: 235.096Å
α: 90° β: 91.781° γ: 90°
R-values:
R R work R free
0.254 0.251 0.305
Expression systems:
  • Spodoptera frugiperda
  • Escherichia coli