6rdg

Electron Microscopy
2.9Å resolution

CryoEM structure of Polytomella F-ATP synthase, Primary rotary state 3, focussed refinement of F1 head and rotor

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero icosamer (preferred)
PDBe Complex ID:
PDB-CPX-105399 (preferred)
Entry contents:
7 distinct polypeptide molecules
Macromolecules (7 distinct):
V-ATPase proteolipid subunit C-like domain-containing protein Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 127 amino acids
Theoretical weight: 12.66 KDa
Source organism: Polytomella sp. Pringsheim 198.80
UniProt:
  • Canonical: D7P7X5 (Residues: 1-127; Coverage: 100%)
Sequence domains: ATP synthase subunit C
Mitochondrial ATP synthase subunit OSCP Chain: P
Molecule details ›
Chain: P
Length: 229 amino acids
Theoretical weight: 25.53 KDa
Source organism: Polytomella sp. Pringsheim 198.80
UniProt:
  • Canonical: D8V7I1 (Residues: 1-229; Coverage: 100%)
Sequence domains: ATP synthase delta (OSCP) subunit
epsilon: Polytomella F-ATP synthase epsilon subunit Chain: Q
ATP synthase F1 complex delta/epsilon subunit N-terminal domain-containing protein Chain: R
ATP synthase subunit gamma, mitochondrial Chain: S
ATP synthase subunit alpha Chains: T, U, V
ATP synthase subunit beta Chains: X, Y, Z

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.9Å
Relevant EMDB volumes: EMD-4817