6s8v

X-ray diffraction
1.8Å resolution

Structure of the high affinity Anticalin P3D11 in complex with the human CD98 heavy chain ectodomain

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-140014 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Neutrophil gelatinase-associated lipocalin Chains: A, C
Molecule details ›
Chains: A, C
Length: 186 amino acids
Theoretical weight: 21.13 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P80188 (Residues: 21-198; Coverage: 100%)
Gene names: HNL, LCN2, NGAL
Sequence domains: Lipocalin / cytosolic fatty-acid binding protein family
Amino acid transporter heavy chain SLC3A2 Chains: B, D
Molecule details ›
Chains: B, D
Length: 431 amino acids
Theoretical weight: 47.49 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P08195 (Residues: 212-630; Coverage: 67%)
Gene names: MDU1, SLC3A2
Sequence domains: Alpha amylase, catalytic domain

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: BESSY BEAMLINE 14.2
Spacegroup: C2
Unit cell:
a: 202.809Å b: 46.052Å c: 137.092Å
α: 90° β: 106.64° γ: 90°
R-values:
R R work R free
0.185 0.184 0.226
Expression systems:
  • Escherichia coli
  • Escherichia coli BL21