› 6spg

Electron Microscopy
3.34Å resolution

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Released:
DOI: 10.2210/pdb6spg/pdb
PDB entry 6spg coloured by chain, front view.
PDB entry 6spg coloured by chain, side view.
PDB entry 6spg coloured by chain, top view.
Source organism: Pseudomonas aeruginosa
Primary publication:
Structure of Pseudomonas aeruginosa ribosomes from an aminoglycoside-resistant clinical isolate.
Halfon Y, Jimenez-Fernandez A, La Rosa R, Espinosa Portero R, Krogh Johansen H, Matzov D, Eyal Z, Bashan A, Zimmerman E, Belousoff M, Molin S, Yonath A
Proc Natl Acad Sci U S A 116 22275-22281 (2019)
PMID: 31611393
Related structures: EMD-10285

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 53-mer (preferred)
PDBe Complex ID:
PDB-CPX-243846 (preferred)
Entry contents:
50 distinct polypeptide molecules
3 distinct RNA molecules
Macromolecules (53 distinct):
Small ribosomal subunit protein uS2 Chain: b
Molecule details ›
Chain: b
Length: 239 amino acids
Theoretical weight: 26.68 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZPV8 (Residues: 3-241; Coverage: 97%)
Gene names: CAZ10_16950, GNQ48_06145, GUL26_01875, IPC1295_18805, IPC737_19540, NCTC13621_00721, PAERUG_P19_London_7_VIM_2_05_10_03821, rpsB
Sequence domains: Ribosomal protein S2
Small ribosomal subunit protein uS3 Chain: c
Molecule details ›
Chain: c
Length: 205 amino acids
Theoretical weight: 23.44 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A140S919 (Residues: 3-207; Coverage: 90%)
Gene names: CAZ10_34040, CSB93_1990, DT376_00190, GNQ48_26655, GUL26_34490, IPC1295_31605, IPC737_32970, NCTC13621_06482, PAERUG_P19_London_7_VIM_2_05_10_03305, rpsC
Sequence domains:
Small ribosomal subunit protein uS4 Chain: d
Molecule details ›
Chain: d
Length: 205 amino acids
Theoretical weight: 23.19 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZDF7 (Residues: 2-206; Coverage: 100%)
Gene names: CAZ10_34130, DT376_00280, GNQ48_26565, GUL26_34400, IPC1295_31515, IPC737_33060, PAERUG_P19_London_7_VIM_2_05_10_03323, rpsD
Sequence domains:
Small ribosomal subunit protein uS5 Chain: e
Molecule details ›
Chain: e
Length: 156 amino acids
Theoretical weight: 16.43 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A241XG65 (Residues: 11-166; Coverage: 94%)
Gene names: CAZ10_34095, CSB93_2001, DT376_00245, GNQ48_26600, GUL26_34435, IPC1295_31550, IPC737_33025, NCTC13621_06493, PAERUG_P19_London_7_VIM_2_05_10_03316, rpsE
Sequence domains:
Small ribosomal subunit protein bS6 Chain: f
Molecule details ›
Chain: f
Length: 105 amino acids
Theoretical weight: 12.28 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A069Q263 (Residues: 2-106; Coverage: 76%)
Gene names: ALP65_00135, CAZ10_01825, CSB93_0497, DT376_23925, GNQ48_04620, GUL26_08725, IPC1295_07615, IPC737_06170, NCTC13621_03610, PAERUG_P19_London_7_VIM_2_05_10_02992, rpsF
Sequence domains: Ribosomal protein S6
Small ribosomal subunit protein uS7 Chain: g
Molecule details ›
Chain: g
Length: 154 amino acids
Theoretical weight: 17.31 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A2V3F2U6 (Residues: 3-156; Coverage: 99%)
Gene names: CAZ10_33990, CSB93_1980, DT376_04900, GNQ48_26705, GUL26_34540, IPC1295_33155, IPC737_32915, NCTC13621_06471, PAERUG_P19_London_7_VIM_2_05_10_03295, rpsG
Sequence domains: Ribosomal protein S7p/S5e
Small ribosomal subunit protein uS8 Chain: h
Molecule details ›
Chain: h
Length: 129 amino acids
Theoretical weight: 14.06 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXT9 (Residues: 2-130; Coverage: 99%)
Gene names: CAZ10_34080, CSB93_1998, DT376_00230, GNQ48_26615, GUL26_34450, IPC1295_31565, IPC737_33010, NCTC13621_06490, PAERUG_P19_London_7_VIM_2_05_10_03313, rpsH
Sequence domains: Ribosomal protein S8
Small ribosomal subunit protein uS9 Chain: i
Molecule details ›
Chain: i
Length: 126 amino acids
Theoretical weight: 14.14 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A069PXX1 (Residues: 3-128; Coverage: 97%)
Gene names: ALP65_00500, CAZ10_21155, DT376_14745, GNQ48_11360, GUL26_13450, IPC1295_15460, IPC737_20725, NCTC13621_04202, PAERUG_P19_London_7_VIM_2_05_10_00232, rpsI
Sequence domains: Ribosomal protein S9/S16
Small ribosomal subunit protein uS10 Chain: j
Molecule details ›
Chain: j
Length: 96 amino acids
Theoretical weight: 10.89 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXT0 (Residues: 8-103; Coverage: 93%)
Gene names: CAZ10_34005, CSB93_1983, DT376_00155, GNQ48_26690, GUL26_34525, IPC1295_31640, IPC737_32935, NCTC13621_06475, PAERUG_P19_London_7_VIM_2_05_10_03298, rpsJ
Sequence domains: Ribosomal protein S10p/S20e
Small ribosomal subunit protein uS11 Chain: k
Molecule details ›
Chain: k
Length: 115 amino acids
Theoretical weight: 12.09 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXU4 (Residues: 14-128; Coverage: 89%)
Gene names: CAZ10_34125, CSB93_2007, DT376_00275, GNQ48_26570, GUL26_34405, IPC1295_31520, IPC737_33055, PAERUG_P19_London_7_VIM_2_05_10_03322, rpsK
Sequence domains: Ribosomal protein S11
Small ribosomal subunit protein uS12 Chain: l
Molecule details ›
Chain: l
Length: 121 amino acids
Theoretical weight: 13.57 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A071L394 (Residues: 2-122; Coverage: 98%)
Gene names: CAZ10_33985, CSB93_1979, DT376_04905, GNQ48_26710, GUL26_34545, IPC1295_33150, IPC737_32910, PAERUG_P19_London_7_VIM_2_05_10_03294, rpsL
Sequence domains: Ribosomal protein S12/S23
Small ribosomal subunit protein uS13 Chain: m
Molecule details ›
Chain: m
Length: 110 amino acids
Theoretical weight: 12.31 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXU3 (Residues: 3-112; Coverage: 93%)
Gene names: CAZ10_34120, DT376_00270, GNQ48_26575, GUL26_34410, IPC1295_31525, IPC737_33050, PAERUG_P19_London_7_VIM_2_05_10_03321, rpsM
Sequence domains: Ribosomal protein S13/S18
Small ribosomal subunit protein uS14 Chain: n
Molecule details ›
Chain: n
Length: 98 amino acids
Theoretical weight: 11.2 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXT8 (Residues: 3-100; Coverage: 97%)
Gene names: CAZ10_34075, DT376_00225, GNQ48_26620, GUL26_34455, IPC1295_31570, IPC737_33005, NCTC13621_06489, PAERUG_P19_London_7_VIM_2_05_10_03312, rpsN
Sequence domains: Ribosomal protein S14p/S29e
Small ribosomal subunit protein uS15 Chain: o
Molecule details ›
Chain: o
Length: 86 amino acids
Theoretical weight: 9.78 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A071L3R7 (Residues: 3-88; Coverage: 97%)
Gene names: ALP65_03471, CAZ10_02835, CSB93_0290, DT376_25075, GNQ48_21280, GUL26_09965, IPC1295_06610, IPC737_07210, PAERUG_P19_London_7_VIM_2_05_10_01502, rpsO
Sequence domains: Ribosomal protein S15
Small ribosomal subunit protein bS16 Chain: p
Molecule details ›
Chain: p
Length: 78 amino acids
Theoretical weight: 8.76 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A2V4FRZ2 (Residues: 1-78; Coverage: 94%)
Gene names: ALP65_02195, CAZ10_17400, CSB93_2527, DT376_21845, GUL26_01425, IPC1295_19255, NCTC13621_00617, PAERUG_P19_London_7_VIM_2_05_10_03417, rpsP
Sequence domains: Ribosomal protein S16
Small ribosomal subunit protein uS17 Chain: q
Molecule details ›
Chain: q
Length: 76 amino acids
Theoretical weight: 8.85 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXT5 (Residues: 9-84; Coverage: 86%)
Gene names: CAZ10_34055, CSB93_1993, DT376_00205, GNQ48_26640, GUL26_34475, IPC1295_31590, IPC737_32985, PAERUG_P19_London_7_VIM_2_05_10_03308, rpsQ
Sequence domains: Ribosomal protein S17
Small ribosomal subunit protein bS18 Chain: r
Molecule details ›
Chain: r
Length: 71 amino acids
Theoretical weight: 8.35 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A2V3DLV3 (Residues: 4-74; Coverage: 93%)
Gene names: ALP65_100000, CAZ10_01830, CSB93_0496, DT376_23920, GNQ48_04625, GUL26_08730, IPC1295_07610, IPC737_06175, NCTC13621_03611, PAERUG_P19_London_7_VIM_2_05_10_02991, rpsR
Sequence domains: Ribosomal protein S18
Small ribosomal subunit protein uS19 Chain: s
Molecule details ›
Chain: s
Length: 80 amino acids
Theoretical weight: 9.18 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXT2 (Residues: 2-81; Coverage: 88%)
Gene names: CAZ10_34030, CSB93_1988, DT376_00180, GNQ48_26665, GUL26_34500, IPC1295_31615, IPC737_32960, NCTC13621_06480, PAERUG_P19_London_7_VIM_2_05_10_03303, rpsS
Sequence domains: Ribosomal protein S19
Small ribosomal subunit protein bS20 Chain: t
Molecule details ›
Chain: t
Length: 85 amino acids
Theoretical weight: 9.43 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZDZ9 (Residues: 3-87; Coverage: 93%)
Gene names: ALP65_02387, DT376_27735, GNQ48_15755, GUL26_14600, IPC1295_27330, IPC737_30940, PAERUG_P19_London_7_VIM_2_05_10_04532, rpsT
Sequence domains: Ribosomal protein S20
Small ribosomal subunit protein bS21 Chain: u
Molecule details ›
Chain: u
Length: 63 amino acids
Theoretical weight: 7.52 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A069QC99 (Residues: 5-67; Coverage: 89%)
Gene names: ALP65_01521, CAZ10_18885, CSB93_1880, DT376_28965, GNQ48_07015, GUL26_17630, IPC1295_08805, IPC737_10955, NCTC13621_06358, PAERUG_P19_London_7_VIM_2_05_10_01930, rpsU
Sequence domains: Ribosomal protein S21
Large ribosomal subunit protein uL2 Chain: C
Molecule details ›
Chain: C
Length: 271 amino acids
Theoretical weight: 29.44 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A241XHA2 (Residues: 3-273; Coverage: 99%)
Gene names: CAZ10_34025, CSB93_1987, DT376_00175, GNQ48_26670, GUL26_34505, IPC1295_31620, NCTC13621_06479, PAERUG_P19_London_7_VIM_2_05_10_03302, rplB
Sequence domains:
Large ribosomal subunit protein uL3 Chain: D
Molecule details ›
Chain: D
Length: 207 amino acids
Theoretical weight: 22.18 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZBZ2 (Residues: 3-209; Coverage: 98%)
Gene names: CAZ10_34010, CSB93_1984, DT376_00160, GNQ48_26685, GUL26_34520, IPC1295_31635, IPC737_32940, NCTC13621_06476, PAERUG_P19_London_7_VIM_2_05_10_03299, rplC
Sequence domains: Ribosomal protein L3
Large ribosomal subunit protein uL4 Chain: E
Molecule details ›
Chain: E
Length: 199 amino acids
Theoretical weight: 21.54 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A241XH26 (Residues: 2-200; Coverage: 100%)
Gene names: CAZ10_34015, CSB93_1985, DT376_00165, GNQ48_26680, IPC1295_31630, IPC737_32945, NCTC13621_06477, PAERUG_P19_London_7_VIM_2_05_10_03300, rplD
Sequence domains: Ribosomal protein L4/L1 family
Large ribosomal subunit protein uL5 Chain: F
Molecule details ›
Chain: F
Length: 174 amino acids
Theoretical weight: 19.8 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZMU2 (Residues: 3-176; Coverage: 97%)
Gene names: CAZ10_34070, DT376_00220, GNQ48_26625, GUL26_34460, IPC1295_31575, IPC737_33000, NCTC13621_06488, PAERUG_P19_London_7_VIM_2_05_10_03311, rplE
Sequence domains:
Large ribosomal subunit protein uL6 Chain: G
Molecule details ›
Chain: G
Length: 173 amino acids
Theoretical weight: 18.61 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A2V3F3S9 (Residues: 2-174; Coverage: 98%)
Gene names: CAZ10_34085, CSB93_1999, DT376_00235, GNQ48_26610, GUL26_34445, IPC1295_31560, IPC737_33015, NCTC13621_06491, PAERUG_P19_London_7_VIM_2_05_10_03314, rplF
Sequence domains: Ribosomal protein L6
Large ribosomal subunit protein bL9 Chain: H
Molecule details ›
Chain: H
Length: 78 amino acids
Theoretical weight: 8.22 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZKF0 (Residues: 2-79; Coverage: 53%)
Gene names: ALP65_00134, CAZ10_01840, CSB93_0494, GNQ48_04635, GUL26_08740, IPC1295_07600, IPC737_06185, PAERUG_P19_London_7_VIM_2_05_10_02989, rplI
Sequence domains: Ribosomal protein L9, N-terminal domain
Large ribosomal subunit protein uL11 Chain: I
Molecule details ›
Chain: I
Length: 140 amino acids
Theoretical weight: 14.62 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A2V3GYK0 (Residues: 3-142; Coverage: 98%)
Gene names: CAZ10_33955, CSB93_1973, DT376_28780, GNQ48_26740, GUL26_34575, IPC1295_33120, IPC737_32880, NCTC13621_06460, PAERUG_P19_London_7_VIM_2_05_10_03288, rplK
Sequence domains:
Large ribosomal subunit protein uL13 Chain: J
Molecule details ›
Chain: J
Length: 141 amino acids
Theoretical weight: 15.93 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A071L356 (Residues: 2-142; Coverage: 99%)
Gene names: ALP65_00501, CAZ10_21150, GNQ48_11365, GUL26_13455, NCTC13621_04201, PAERUG_P19_London_7_VIM_2_05_10_00231, rplM
Sequence domains: Ribosomal protein L13
Large ribosomal subunit protein uL14 Chain: K
Molecule details ›
Chain: K
Length: 120 amino acids
Theoretical weight: 13.22 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXT6 (Residues: 1-120; Coverage: 98%)
Gene names: CAZ10_34060, CSB93_1994, DT376_00210, GNQ48_26635, GUL26_34470, IPC1295_31585, IPC737_32990, NCTC13621_06486, PAERUG_P19_London_7_VIM_2_05_10_03309, rplN
Sequence domains: Ribosomal protein L14p/L23e
Large ribosomal subunit protein uL15 Chain: L
Molecule details ›
Chain: L
Length: 143 amino acids
Theoretical weight: 15.07 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A2V3D5Z8 (Residues: 2-144; Coverage: 99%)
Gene names: CAZ10_34105, CSB93_2003, DT376_00255, GNQ48_26590, GUL26_34425, IPC1295_31540, IPC737_33035, NCTC13621_06495, PAERUG_P19_London_7_VIM_2_05_10_03318, rplO
Sequence domains: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Large ribosomal subunit protein uL16 Chain: M
Molecule details ›
Chain: M
Length: 135 amino acids
Theoretical weight: 15.2 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A069QEB6 (Residues: 1-135; Coverage: 99%)
Gene names: CAZ10_34045, DT376_00195, GNQ48_26650, GUL26_34485, IPC1295_31600, IPC737_32975, NCTC13621_06483, PAERUG_P19_London_7_VIM_2_05_10_03306, rplP
Sequence domains: Ribosomal protein L16p/L10e
Large ribosomal subunit protein bL17 Chain: N
Molecule details ›
Chain: N
Length: 118 amino acids
Theoretical weight: 13.5 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZCA1 (Residues: 1-118; Coverage: 92%)
Gene names: CAZ10_34140, CSB93_2010, DT376_00290, GNQ48_26555, GUL26_34390, IPC1295_31505, IPC737_33070, NCTC13621_06502, PAERUG_P19_London_7_VIM_2_05_10_03325, rplQ
Sequence domains: Ribosomal protein L17
Large ribosomal subunit protein uL18 Chain: O
Molecule details ›
Chain: O
Length: 115 amino acids
Theoretical weight: 12.56 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXU0 (Residues: 2-116; Coverage: 99%)
Gene names: CAZ10_34090, CSB93_2000, DT376_00240, GNQ48_26605, GUL26_34440, IPC1295_31555, IPC737_33020, NCTC13621_06492, PAERUG_P19_London_7_VIM_2_05_10_03315, rplR
Sequence domains: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
Large ribosomal subunit protein bL19 Chain: P
Molecule details ›
Chain: P
Length: 113 amino acids
Theoretical weight: 12.71 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A263PZC6 (Residues: 4-116; Coverage: 97%)
Gene names: ALP65_02198, CAZ10_17385, CSB93_2530, GNQ48_05710, GUL26_01440, IPC1295_19240, IPC737_19105, NCTC13621_00620, PAERUG_P19_London_7_VIM_2_05_10_03414, rplS
Sequence domains: Ribosomal protein L19
Large ribosomal subunit protein bL20 Chain: Q
Molecule details ›
Chain: Q
Length: 117 amino acids
Theoretical weight: 13.27 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A069QEE3 (Residues: 2-118; Coverage: 99%)
Gene names: ALP65_100001, CAZ10_22890, CCBH4851_00613, CSB93_3779, DT376_19515, GNQ48_27455, GUL26_12265, IPC1295_00975, IPC737_00185, NCTC13621_02457, PAERUG_P19_London_7_VIM_2_05_10_03244, rplT
Sequence domains: Ribosomal protein L20
Large ribosomal subunit protein bL21 Chain: R
Molecule details ›
Chain: R
Length: 102 amino acids
Theoretical weight: 11.61 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZDZ0 (Residues: 1-102; Coverage: 99%)
Gene names: ALP65_02383, CAZ10_23890, DT376_12415, GNQ48_15780, IPC1295_27305, IPC737_30965, NCTC13621_04050, PAERUG_P19_London_7_VIM_2_05_10_04527, rplU
Sequence domains: Ribosomal prokaryotic L21 protein
50S ribosomal protein L22 Chain: S
Molecule details ›
Chain: S
Length: 109 amino acids
Theoretical weight: 11.8 KDa
Source organism: Pseudomonas aeruginosa
Large ribosomal subunit protein uL23 Chain: T
Molecule details ›
Chain: T
Length: 92 amino acids
Theoretical weight: 10.23 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXT1 (Residues: 2-93; Coverage: 93%)
Gene names: CAZ10_34020, CSB93_1986, DT376_00170, GNQ48_26675, GUL26_34510, IPC1295_31625, IPC737_32950, NCTC13621_06478, PAERUG_P19_London_7_VIM_2_05_10_03301, rplW
Sequence domains: Ribosomal protein L23
Large ribosomal subunit protein uL24 Chain: U
Molecule details ›
Chain: U
Length: 103 amino acids
Theoretical weight: 11.42 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXT7 (Residues: 1-103; Coverage: 99%)
Gene names: CAZ10_34065, CSB93_1995, DT376_00215, GNQ48_26630, GUL26_34465, IPC1295_31580, IPC737_32995, NCTC13621_06487, PAERUG_P19_London_7_VIM_2_05_10_03310, rplX
Sequence domains:
Large ribosomal subunit protein bL25 Chain: V
Molecule details ›
Chain: V
Length: 188 amino acids
Theoretical weight: 20.35 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZBM5 (Residues: 4-191; Coverage: 92%)
Gene names: ALP65_02117, CAZ10_24445, DT376_10315, GUL26_34190, NCTC13621_03938, PAERUG_P19_London_7_VIM_2_05_10_02527, ctc, rplY
Sequence domains:
Large ribosomal subunit protein bL27 Chain: W
Molecule details ›
Chain: W
Length: 76 amino acids
Theoretical weight: 8.12 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A071LFT4 (Residues: 10-85; Coverage: 89%)
Gene names: ALP65_02384, CAZ10_23885, CSB93_0079, GNQ48_15775, GUL26_14620, IPC1295_27310, IPC737_30960, NCTC13621_04051, PAERUG_P19_London_7_VIM_2_05_10_04528, rpmA
Sequence domains: Ribosomal L27 protein
Large ribosomal subunit protein bL28 Chain: X
Molecule details ›
Chain: X
Length: 77 amino acids
Theoretical weight: 8.96 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZIQ9 (Residues: 2-78; Coverage: 99%)
Gene names: CAZ10_32270, CSB93_0937, DT376_24060, GNQ48_25255, GUL26_21715, IPC1295_10490, IPC737_07765, PAERUG_P19_London_7_VIM_2_05_10_01824, rpmB
Sequence domains: Ribosomal L28 family
Ribosomal protein uL29 Chain: Y
Molecule details ›
Chain: Y
Length: 60 amino acids
Theoretical weight: 6.81 KDa
Source organism: Pseudomonas aeruginosa
Large ribosomal subunit protein uL30 Chain: Z
Molecule details ›
Chain: Z
Length: 57 amino acids
Theoretical weight: 6.36 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXU1 (Residues: 2-58; Coverage: 98%)
Gene names: CAZ10_34100, CSB93_2002, DT376_00250, GNQ48_26595, GUL26_34430, IPC1295_31545, IPC737_33030, NCTC13621_06494, PAERUG_P19_London_7_VIM_2_05_10_03317, rpmD
Sequence domains: Ribosomal protein L30p/L7e
Large ribosomal subunit protein bL31 Chain: 1
Molecule details ›
Chain: 1
Length: 31 amino acids
Theoretical weight: 3.37 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A072ZJG4 (Residues: 2-32; Coverage: 44%)
Gene names: ALP65_00293, CAZ10_01210, GNQ48_04035, GUL26_08140, IPC1295_08220, IPC737_05565, PAERUG_P19_London_7_VIM_2_05_10_03109, rpmE
Sequence domains: Ribosomal protein L31
Large ribosomal subunit protein bL32 Chain: 2
Molecule details ›
Chain: 2
Length: 53 amino acids
Theoretical weight: 6.04 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A069QB25 (Residues: 2-54; Coverage: 88%)
Gene names: ALP65_100346, CAZ10_04440, CSB93_3437, DT376_15405, GNQ48_10545, GUL26_15675, IPC1295_02700, IPC737_03130, PAERUG_P19_London_7_VIM_2_05_10_03684, rpmF
Sequence domains: Ribosomal L32p protein family
Large ribosomal subunit protein bL33 Chain: 3
Molecule details ›
Chain: 3
Length: 50 amino acids
Theoretical weight: 5.93 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A140SG33 (Residues: 2-51; Coverage: 98%)
Gene names: CAZ10_32265, CSB93_0936, DT376_24055, GNQ48_25260, GUL26_21720, IPC1295_10495, IPC737_07770, NCTC13621_05255, PAERUG_P19_London_7_VIM_2_05_10_01825, rpmG
Sequence domains: Ribosomal protein L33
Large ribosomal subunit protein bL34 Chain: 4
Molecule details ›
Chain: 4
Length: 44 amino acids
Theoretical weight: 5.23 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A087L9L7 (Residues: 1-44; Coverage: 100%)
Gene names: CAZ10_15150, CSB93_1230, DT376_00515, GNQ48_22485, GUL26_24265, IPC1295_21510, IPC737_25220, NCTC13621_04967, PAERUG_P19_London_7_VIM_2_05_10_02856, rpmH
Sequence domains: Ribosomal protein L34
Large ribosomal subunit protein bL35 Chain: 5
Molecule details ›
Chain: 5
Length: 63 amino acids
Theoretical weight: 7.26 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: A0A069QC44 (Residues: 2-64; Coverage: 98%)
Gene names: ALP65_01918, CAZ10_22885, CCBH4851_00614, CSB93_3778, DT376_19510, GNQ48_27450, GUL26_12270, IPC1295_00980, IPC737_00190, NCTC13621_02458, PAERUG_P19_London_7_VIM_2_05_10_03243, rpmI
Sequence domains: Ribosomal protein L35
Large ribosomal subunit protein bL36 Chain: 6
Molecule details ›
Chain: 6
Length: 38 amino acids
Theoretical weight: 4.45 KDa
Source organism: Pseudomonas aeruginosa
UniProt:
  • Canonical: E2RXU2 (Residues: 1-38; Coverage: 100%)
Gene names: CAZ10_34115, CSB93_2005, DT376_00265, GNQ48_26580, GUL26_34415, IPC1295_31530, IPC737_33045, NCTC13621_06497, PAERUG_P19_London_7_VIM_2_05_10_03320, rpmJ, rpmJ_2
Sequence domains: Ribosomal protein L36
16S ribosomal RNA Chain: a
Molecule details ›
Chain: a
Length: 1526 nucleotides
Theoretical weight: 494.64 KDa
Sequence domains: Bacterial small subunit ribosomal RNA
23S ribosomal RNA Chain: A
Molecule details ›
Chain: A
Length: 2888 nucleotides
Theoretical weight: 935.99 KDa
Sequence domains: Bacterial large subunit ribosomal RNA
5S ribosomal RNA Chain: B
Molecule details ›
Chain: B
Length: 117 nucleotides
Theoretical weight: 37.68 KDa
Sequence domains: 5S ribosomal RNA

Ligands and Environments

1 bound ligand:
Ligand MG 172 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.34Å
Relevant EMDB volumes: EMD-10285

Quick links

Citations

4 review citations

Pseudomonas aeruginosa adaptation and evolution in patients with cystic fibrosis.
Rossi et al. (2021)
3 more

4 mentions without citation

The major subunit, CfaB, of colonization factor antigen i from enterotoxigenic Escherichia coli is a glycosphingolipid binding protein.
Jansson et al. (2006)
3 more