6sur

X-ray diffraction
3.47Å resolution

The Rab33B-Atg16L1 crystal structure

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-128723 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ras-related protein Rab-33B Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 173 amino acids
Theoretical weight: 19.9 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O35963 (Residues: 30-202; Coverage: 76%)
Gene name: Rab33b
Sequence domains: Ras family
Autophagy-related protein 16-1 Chains: I, J, K, L, M, N
Molecule details ›
Chains: I, J, K, L, M, N
Length: 57 amino acids
Theoretical weight: 6.69 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q8C0J2 (Residues: 154-210; Coverage: 9%)
Gene names: Apg16l, Atg16l1

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06SA
Spacegroup: P21
Unit cell:
a: 48.4Å b: 204.9Å c: 107.2Å
α: 90° β: 92.6° γ: 90°
R-values:
R R work R free
0.207 0.206 0.239
Expression system: Escherichia coli BL21(DE3)