6thd

Electron Microscopy
2.23Å resolution

Multiple Genomic RNA-Coat Protein Contacts Play Vital Roles in the Assembly of Infectious Enterovirus-E

Released:

Function and Biology Details

Reactions catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Selective cleavage of Gln-|-Gly bond in the poliovirus polyprotein. In other picornavirus reactions Glu may be substituted for Gln, and Ser or Thr for Gly.
Selective cleavage of Tyr-|-Gly bond in picornavirus polyprotein.
NTP + H(2)O = NDP + phosphate
Biochemical function:
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
hetero 240-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-146375 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (4 distinct):
Capsid protein VP1 Chain: 1
Molecule details ›
Chain: 1
Length: 281 amino acids
Theoretical weight: 31.28 KDa
Source organism: Bovine enterovirus strain VG-5-27
UniProt:
  • Canonical: P12915 (Residues: 560-840; Coverage: 13%)
Sequence domains: picornavirus capsid protein
Capsid protein VP2 Chain: 2
Molecule details ›
Chain: 2
Length: 248 amino acids
Theoretical weight: 27.33 KDa
Source organism: Bovine enterovirus strain VG-5-27
UniProt:
  • Canonical: P12915 (Residues: 70-317; Coverage: 11%)
Sequence domains: picornavirus capsid protein
Capsid protein VP3 Chain: 3
Molecule details ›
Chain: 3
Length: 242 amino acids
Theoretical weight: 26.63 KDa
Source organism: Bovine enterovirus strain VG-5-27
UniProt:
  • Canonical: P12915 (Residues: 318-559; Coverage: 11%)
Sequence domains: picornavirus capsid protein
Capsid protein VP4 Chain: 4
Molecule details ›
Chain: 4
Length: 52 amino acids
Theoretical weight: 5.62 KDa
Source organism: Bovine enterovirus strain VG-5-27
UniProt:
  • Canonical: P12915 (Residues: 18-69; Coverage: 2%)
Sequence domains: Picornavirus coat protein (VP4)

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.23Å
Relevant EMDB volumes: EMD-10504