6tmh

Electron Microscopy
3.1Å resolution

Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, OSCP/F1/c-ring model

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 21-mer (preferred)
PDBe Complex ID:
PDB-CPX-102874 (preferred)
Entry contents:
8 distinct polypeptide molecules
Macromolecules (8 distinct):
Inhibitor of F1 Chain: i
Molecule details ›
Chain: i
Length: 145 amino acids
Theoretical weight: 16.17 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YJP2 (Residues: 1-145; Coverage: 100%)
Gene name: TGGT1_215350
ATP synthase subunit alpha Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 565 amino acids
Theoretical weight: 61.19 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: S7UU80 (Residues: 1-561; Coverage: 97%)
Gene name: TGGT1_204400
Sequence domains:
ATP synthase subunit beta Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 560 amino acids
Theoretical weight: 59.98 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YYY4 (Residues: 1-560; Coverage: 100%)
Gene name: TGGT1_261950
Sequence domains:
ATP synthase subunit gamma, mitochondrial Chain: g
Molecule details ›
Chain: g
Length: 314 amino acids
Theoretical weight: 34.57 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YUH0 (Residues: 1-314; Coverage: 100%)
Gene name: TGGT1_231910
Sequence domains: ATP synthase
ATP synthase F1 complex delta/epsilon subunit N-terminal domain-containing protein Chain: d
Molecule details ›
Chain: d
Length: 183 amino acids
Theoretical weight: 19.48 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YRE2 (Residues: 1-183; Coverage: 100%)
Gene name: TGGT1_226000
Sequence domains: ATP synthase, Delta/Epsilon chain, beta-sandwich domain
Putative atp synthase F1, epsilon subunit Chain: e
Molecule details ›
Chain: e
Length: 73 amino acids
Theoretical weight: 8.49 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: S7VV10 (Residues: 1-73; Coverage: 100%)
Gene name: TGGT1_314820
Sequence domains: Mitochondrial ATP synthase epsilon chain
ATP synthase F1, delta subunit protein Chain: G
Molecule details ›
Chain: G
Length: 252 amino acids
Theoretical weight: 27.67 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YKF8 (Residues: 1-252; Coverage: 100%)
Gene name: TGGT1_284540
Sequence domains: ATP synthase delta (OSCP) subunit
V-ATPase proteolipid subunit C-like domain-containing protein Chains: H, I, J, K, L, M, N, O, P, Q
Molecule details ›
Chains: H, I, J, K, L, M, N, O, P, Q
Length: 166 amino acids
Theoretical weight: 17.75 KDa
Source organism: Toxoplasma gondii GT1
UniProt:
  • Canonical: A0A125YJV2 (Residues: 1-166; Coverage: 100%)
Gene name: TGGT1_249720
Sequence domains: ATP synthase subunit C

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.1Å
Relevant EMDB volumes: EMD-10521