6tsu

Electron Microscopy
3.42Å resolution

Capsid of empty GTA particle computed with C5 symmetry

Released:
Source organism: Rhodobacter capsulatus DE442
Related structures: EMD-10565

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
hetero 210-mer (preferred)
PDBe Complex ID:
PDB-CPX-112667 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Phage capsid-like C-terminal domain-containing protein Chains: A4, A5, B4, B5, C4, C5, D4, E4, F4, G4, H4, I4, J4, K4, L4, M4, N4, O4, P4, Q4, R4, S4, T4, U4, V4, W4, X4, Y4, Z4
Molecule details ›
Chains: A4, A5, B4, B5, C4, C5, D4, E4, F4, G4, H4, I4, J4, K4, L4, M4, N4, O4, P4, Q4, R4, S4, T4, U4, V4, W4, X4, Y4, Z4
Length: 386 amino acids
Theoretical weight: 40.98 KDa
Source organism: Rhodobacter capsulatus DE442
UniProt:
  • Canonical: D5ATZ3 (Residues: 13-398; Coverage: 97%)
Gene name: RCAP_rcc01687
Sequence domains: Phage capsid family
Uncharacterized protein Chains: A1, A2, A3, B2, B3, C2, C3, D2, D3, E2, E3
Molecule details ›
Chains: A1, A2, A3, B2, B3, C2, C3, D2, D3, E2, E3
Length: 84 amino acids
Theoretical weight: 9.1 KDa
Source organism: Rhodobacter capsulatus DE442
UniProt:
  • Canonical: D5AR33 (Residues: 1-84; Coverage: 100%)
Gene name: RCAP_rcc01079
Uncharacterized protein Chains: F2, F3
Molecule details ›
Chains: F2, F3
Length: 325 amino acids
Theoretical weight: 33 KDa
Source organism: Rhodobacter capsulatus DE442
UniProt:
  • Canonical: D5AR34 (Residues: 1-325; Coverage: 100%)
Gene name: RCAP_rcc01080

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.42Å
Relevant EMDB volumes: EMD-10565