Function and Biology Details
Reaction catalysed:
The C-O-P bond 3' to the apurinic or apyrimidinic site in DNA is broken by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Biochemical function:
- not assigned
Biological process:
- not assigned
Cellular component:
- not assigned
Sequence domain:
Structure analysis Details
Assembly composition:
hetero 44-mer (preferred)
PDBe Complex ID:
PDB-CPX-244009 (preferred)
Entry contents:
42 distinct polypeptide molecules
2 distinct RNA molecules
2 distinct RNA molecules
Macromolecules (44 distinct):
Small ribosomal subunit protein uS2
Chain: B
Molecule details ›
Chain: B
Length: 295 amino acids
Theoretical weight: 33.02 KDa
Source organism: Oryctolagus cuniculus
Length: 295 amino acids
Theoretical weight: 33.02 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS1
Chain: C
Small ribosomal subunit protein uS5
Chain: D
Molecule details ›
Chain: D
Length: 255 amino acids
Theoretical weight: 27.53 KDa
Source organism: Oryctolagus cuniculus
Length: 255 amino acids
Theoretical weight: 27.53 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS4
Chain: F
Molecule details ›
Chain: F
Length: 263 amino acids
Theoretical weight: 29.6 KDa
Source organism: Oryctolagus cuniculus
Length: 263 amino acids
Theoretical weight: 29.6 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS6
Chain: H
Molecule details ›
Chain: H
Length: 249 amino acids
Theoretical weight: 28.75 KDa
Source organism: Oryctolagus cuniculus
Length: 249 amino acids
Theoretical weight: 28.75 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS7
Chain: I
Molecule details ›
Chain: I
Length: 194 amino acids
Theoretical weight: 22.17 KDa
Source organism: Oryctolagus cuniculus
Length: 194 amino acids
Theoretical weight: 22.17 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS8
Chain: J
Molecule details ›
Chain: J
Length: 208 amino acids
Theoretical weight: 24.26 KDa
Source organism: Oryctolagus cuniculus
Length: 208 amino acids
Theoretical weight: 24.26 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS4
Chain: K
Molecule details ›
Chain: K
Length: 194 amino acids
Theoretical weight: 22.64 KDa
Source organism: Oryctolagus cuniculus
Length: 194 amino acids
Theoretical weight: 22.64 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS17
Chain: M
Molecule details ›
Chain: M
Length: 158 amino acids
Theoretical weight: 18.47 KDa
Source organism: Oryctolagus cuniculus
Length: 158 amino acids
Theoretical weight: 18.47 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS15
Chain: O
Molecule details ›
Chain: O
Length: 151 amino acids
Theoretical weight: 17.26 KDa
Source organism: Oryctolagus cuniculus
Length: 151 amino acids
Theoretical weight: 17.26 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS11
Chain: P
Molecule details ›
Chain: P
Length: 151 amino acids
Theoretical weight: 16.3 KDa
Source organism: Oryctolagus cuniculus
Length: 151 amino acids
Theoretical weight: 16.3 KDa
Source organism: Oryctolagus cuniculus
eS21
Chain: W
Small ribosomal subunit protein uS8
Chain: X
Molecule details ›
Chain: X
Length: 130 amino acids
Theoretical weight: 14.87 KDa
Source organism: Oryctolagus cuniculus
Length: 130 amino acids
Theoretical weight: 14.87 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS12
Chain: Y
Molecule details ›
Chain: Y
Length: 143 amino acids
Theoretical weight: 15.78 KDa
Source organism: Oryctolagus cuniculus
Length: 143 amino acids
Theoretical weight: 15.78 KDa
Source organism: Oryctolagus cuniculus
40S ribosomal protein S24
Chain: Z
Molecule details ›
Chain: Z
Length: 134 amino acids
Theoretical weight: 15.55 KDa
Source organism: Oryctolagus cuniculus
Length: 134 amino acids
Theoretical weight: 15.55 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS26
Chain: b
Molecule details ›
Chain: b
Length: 115 amino acids
Theoretical weight: 13.02 KDa
Source organism: Oryctolagus cuniculus
Length: 115 amino acids
Theoretical weight: 13.02 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS27
Chain: c
Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein
Chain: f
Molecule details ›
Chain: f
Length: 133 amino acids
Theoretical weight: 14.5 KDa
Source organism: Oryctolagus cuniculus
Length: 133 amino acids
Theoretical weight: 14.5 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS3
Chain: E
Molecule details ›
Chain: E
Length: 281 amino acids
Theoretical weight: 31.15 KDa
Source organism: Oryctolagus cuniculus
Length: 281 amino acids
Theoretical weight: 31.15 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS7
Chain: G
Molecule details ›
Chain: G
Length: 204 amino acids
Theoretical weight: 22.91 KDa
Source organism: Oryctolagus cuniculus
Length: 204 amino acids
Theoretical weight: 22.91 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS10
Chain: L
Molecule details ›
Chain: L
Length: 149 amino acids
Theoretical weight: 17.16 KDa
Source organism: Oryctolagus cuniculus
Length: 149 amino acids
Theoretical weight: 17.16 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS12
Chain: N
Molecule details ›
Chain: N
Length: 132 amino acids
Theoretical weight: 14.54 KDa
Source organism: Oryctolagus cuniculus
Length: 132 amino acids
Theoretical weight: 14.54 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS19
Chain: Q
Molecule details ›
Chain: Q
Length: 145 amino acids
Theoretical weight: 17.05 KDa
Source organism: Oryctolagus cuniculus
Length: 145 amino acids
Theoretical weight: 17.05 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS9
Chain: R
Molecule details ›
Chain: R
Length: 172 amino acids
Theoretical weight: 19.21 KDa
Source organism: Oryctolagus cuniculus
Length: 172 amino acids
Theoretical weight: 19.21 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS17
Chain: S
Molecule details ›
Chain: S
Length: 135 amino acids
Theoretical weight: 15.55 KDa
Source organism: Oryctolagus cuniculus
Length: 135 amino acids
Theoretical weight: 15.55 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS13
Chain: T
Molecule details ›
Chain: T
Length: 152 amino acids
Theoretical weight: 17.76 KDa
Source organism: Oryctolagus cuniculus
Length: 152 amino acids
Theoretical weight: 17.76 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS19
Chain: U
Molecule details ›
Chain: U
Length: 145 amino acids
Theoretical weight: 16.24 KDa
Source organism: Oryctolagus cuniculus
Length: 145 amino acids
Theoretical weight: 16.24 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein uS10
Chain: V
Molecule details ›
Chain: V
Length: 119 amino acids
Theoretical weight: 13.4 KDa
Source organism: Oryctolagus cuniculus
Length: 119 amino acids
Theoretical weight: 13.4 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS25
Chain: i
Molecule details ›
Chain: i
Length: 125 amino acids
Theoretical weight: 13.78 KDa
Source organism: Oryctolagus cuniculus
Length: 125 amino acids
Theoretical weight: 13.78 KDa
Source organism: Oryctolagus cuniculus
Small ribosomal subunit protein eS28
Chain: d
Small ribosomal subunit protein uS14
Chain: e
Ubiquitin-ribosomal protein eS31 fusion protein
Chain: g
Small ribosomal subunit protein RACK1
Chain: h
Molecule details ›
Chain: h
Length: 317 amino acids
Theoretical weight: 35.12 KDa
Source organism: Oryctolagus cuniculus
Length: 317 amino acids
Theoretical weight: 35.12 KDa
Source organism: Oryctolagus cuniculus
Eukaryotic translation initiation factor 3 subunit E
Chain: 3
Molecule details ›
Chain: 3
Length: 462 amino acids
Theoretical weight: 54.2 KDa
Source organism: Oryctolagus cuniculus
Length: 462 amino acids
Theoretical weight: 54.2 KDa
Source organism: Oryctolagus cuniculus
Eukaryotic translation initiation factor 3 subunit F
Chain: 4
Molecule details ›
Chain: 4
Length: 364 amino acids
Theoretical weight: 37.85 KDa
Source organism: Oryctolagus cuniculus
Length: 364 amino acids
Theoretical weight: 37.85 KDa
Source organism: Oryctolagus cuniculus
Eukaryotic translation initiation factor 3 subunit K
Chain: 6
Molecule details ›
Chain: 6
Length: 218 amino acids
Theoretical weight: 25.13 KDa
Source organism: Oryctolagus cuniculus
Length: 218 amino acids
Theoretical weight: 25.13 KDa
Source organism: Oryctolagus cuniculus
Eukaryotic translation initiation factor 3 subunit L
Chain: 7
Eukaryotic translation initiation factor 3 subunit M
Chain: 8
Molecule details ›
Chain: 8
Length: 374 amino acids
Theoretical weight: 42.56 KDa
Source organism: Oryctolagus cuniculus
Length: 374 amino acids
Theoretical weight: 42.56 KDa
Source organism: Oryctolagus cuniculus
Eukaryotic translation initiation factor 3 subunit A
Chain: 1
Molecule details ›
Chain: 1
Length: 1362 amino acids
Theoretical weight: 164.9 KDa
Source organism: Oryctolagus cuniculus
Length: 1362 amino acids
Theoretical weight: 164.9 KDa
Source organism: Oryctolagus cuniculus
Eukaryotic translation initiation factor 3 subunit C
Chain: 2
Molecule details ›
Chain: 2
Length: 913 amino acids
Theoretical weight: 105.71 KDa
Source organism: Oryctolagus cuniculus
Length: 913 amino acids
Theoretical weight: 105.71 KDa
Source organism: Oryctolagus cuniculus
Eukaryotic translation initiation factor 3 subunit D
Chain: 9
Molecule details ›
Chain: 9
Length: 558 amino acids
Theoretical weight: 64.52 KDa
Source organism: Oryctolagus cuniculus
Length: 558 amino acids
Theoretical weight: 64.52 KDa
Source organism: Oryctolagus cuniculus
Eukaryotic translation initiation factor 3 subunit H
Chain: 5
Molecule details ›
Chain: 5
Length: 363 amino acids
Theoretical weight: 41.08 KDa
Source organism: Oryctolagus cuniculus
Length: 363 amino acids
Theoretical weight: 41.08 KDa
Source organism: Oryctolagus cuniculus
18S Ribosomal RNA
Chain: a
Molecule details ›
Chain: a
Length: 1697 nucleotides
Theoretical weight: 547.73 KDa
Source organism: Oryctolagus cuniculus
Sequence domains: Eukaryotic small subunit ribosomal RNA
Length: 1697 nucleotides
Theoretical weight: 547.73 KDa
Source organism: Oryctolagus cuniculus
Sequence domains: Eukaryotic small subunit ribosomal RNA
CrPV 5'-UTR IRES
Chain: A
Molecule details ›
Chain: A
Length: 377 nucleotides
Theoretical weight: 121.09 KDa
Source organism: Cricket paralysis virus
Expression system: Escherichia coli
Length: 377 nucleotides
Theoretical weight: 121.09 KDa
Source organism: Cricket paralysis virus
Expression system: Escherichia coli