› 6w3m

Solution NMR

Solution NMR Structure of 5'UTR Stem Loop B in DENV4 Flavivirus.

Released:
DOI: 10.2210/pdb6w3m/pdb
PDB entry 6w3m coloured by chain, ensemble of 10 models, front view.
PDB entry 6w3m coloured by chain, ensemble of 10 models, side view.
PDB entry 6w3m coloured by chain, ensemble of 10 models, top view.
Source organism: Dengue virus 4 Philippines/H241/1956
Primary publication:
NMR structure of Dengue West Nile viruses stem-loop B: A key cis-acting element for flavivirus replication.
Sharma S, Varani G
Biochem Biophys Res Commun 531 522-527 (2020)
PMID: 32807496

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-197155 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (41-MER) Chain: A
Molecule details ›
Chain: A
Length: 41 nucleotides
Theoretical weight: 13.25 KDa
Source organism: Dengue virus 4 Philippines/H241/1956
Expression system: Dengue virus 4 Philippines/H241/1956

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this NMR entry.
Chemical shift assignment: 74%
Refinement method: simulated annealing
Expression system: Dengue virus 4 Philippines/H241/1956

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Citations

3 review citations

Information Encoded by the Flavivirus Genomes beyond the Nucleotide Sequence.
Ramos-Lorente et al. (2021)
2 more

1 mention without citation

NMR structure of Dengue West Nile viruses stem-loop B: A key cis-acting element for flavivirus replication.
Sharma et al. (2020)