› 6w47

X-ray diffraction
1.15Å resolution

Peptoid-Containing Collagen Peptide

Released:
DOI: 10.2210/pdb6w47/pdb
PDB entry 6w47 coloured by chain, front view.
PDB entry 6w47 coloured by chain, side view.
PDB entry 6w47 coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Rules for the design of aza-glycine stabilized triple-helical collagen peptides.
Melton SD, Brackhahn EAE, Orlin SJ, Jin P, Chenoweth DM
OpenAccess logo Chem Sci 11 10638-10646 (2020)
PMID: 34094319

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-167685 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Collagen-like peptide Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 28 amino acids
Theoretical weight: 2.42 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand EDO 1 x EDO
3 modified residues:
Ligand HYP 24 x HYP
Ligand SAR 3 x SAR
Ligand GLZ 3 x GLZ

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: P21
Unit cell:
a: 31.679Å b: 19.556Å c: 37.528Å
α: 90° β: 98.92° γ: 90°
R-values:
R R work R free
0.187 0.183 0.217
Expression system: Not provided

Quick links

Citations

1 citations in other articles

Next-Generation Sequencing (NGS) Analysis Illustrates the Phenotypic Variability of Collagen Type IV Nephropathies.
Zacchia et al. (2023)

1 mention without citation

Rules for the design of aza-glycine stabilized triple-helical collagen peptides.
Melton et al. (2020)