Structure analysis

Structure of the LaINDY-alpha-ketoglutarate complex

Electron Microscopy
3.71Å resolution
Source organism: Lactobacillus acidophilus
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

Assemblies

Assembly 1 (preferred)
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Multimeric state: homo dimer
Accessible surface area: 37659.05 Å2
Buried surface area: 5635.46 Å2
Dissociation area: 2,817.73 Å2
Dissociation energy (ΔGdiss): 42.99 kcal/mol
Dissociation entropy (TΔSdiss): 15.14 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-177108

Macromolecules

Chains: A, B
Length: 516 amino acids
Theoretical weight: 56.56 KDa
Source organism: Lactobacillus acidophilus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5FKK5 (Residues: 1-488; Coverage: 100%)
Gene name: LBA0912
Pfam: Sodium:sulfate symporter transmembrane region
InterPro:
PDBe-KB: UniProt Coverage View: Q5FKK5  
151650100150200250300350400450500
 
200400MHHHHHHHHHHSSGVDLGTENLYFQSNAMKTLEKVNYKGFIWPLAVGIVLWLITPWRPGGLSVQAWEMFAIFVATIVGCITKPLPIGGTTLLGMVVTVLVGLAPVKDVVNSKGVVIQTGILSSFGNSAAWLIAMAFIMAHGISKTGLGNRVAYVMIEKFGKRSIGIGYAITGLELMMGALIPSNSARTGGVTWPVVESISKSYDSKPNDPSRKKIGAYLDFMAFHANILSTALFITGAAPNLVAQQMAAQKGYQMSWVSWFWAALVPVLVATVIIPLVIYKMYPPEVKETPNAKNWADDKLKEMGPISKPEKIMATVFCLAILLWVLSGFFKIPQLDSAFVAFLAVTLLLITGVLSMEDALHETGAWNILIWLSILIFMAGKLISYGFIAWFAKFIQSEVHGINWGLVLVVLILLMFYTHYFFASGTAHMTALYLPFLTVATAMGAPLGLSAMLLAFTGVINASTTHYANGPASILATTGYVKQSEWWKMNFILGLIYMVIFGIVGTIWMKIIGIW
UniProt
Q5FKK5
Chains
Domains
Secondary structure
Flexibility predictions
Interaction interfaces
Sequence conservation

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