› 6ygi

Electron Microscopy
3Å resolution

Duck hepatitis B virus capsid Mutant R124E_delta78-122

Released:
DOI: 10.2210/pdb6ygi/pdb
PDB entry 6ygi coloured by chain, front view.
PDB entry 6ygi coloured by chain, side view.
PDB entry 6ygi coloured by chain, top view.
Source organism: Hepatitis B virus duck/DHBV-16
Primary publication:
Slowly folding surface extension in the prototypic avian hepatitis B virus capsid governs stability.
Makbul C, Nassal M, Böttcher B
Elife 9 (2020)
PMID: 32795390
Related structures: EMD-10803

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo 360-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-143055 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein Chains: A, B, C, D, E, H
Molecule details ›
Chains: A, B, C, D, E, H
Length: 222 amino acids
Theoretical weight: 25.5 KDa
Source organism: Hepatitis B virus duck/DHBV-16
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P0C6J7 (Residues: 1-77, 123-262; Coverage: 83%)
Gene name: C
Sequence domains: Hepatitis core antigen

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3Å
Relevant EMDB volumes: EMD-10803
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

3 review citations

Solid-State NMR for Studying the Structure and Dynamics of Viral Assemblies.
Lecoq et al. (2020)
2 more

1 mention without citation

Slowly folding surface extension in the prototypic avian hepatitis B virus capsid governs stability.
Makbul et al. (2020)