› 6yy4

Solution NMR

Parallel 17-mer DNA G-quadruplex

Released:
DOI: 10.2210/pdb6yy4/pdb
PDB entry 6yy4 coloured by chain, ensemble of 20 models, front view.
PDB entry 6yy4 coloured by chain, ensemble of 20 models, side view.
PDB entry 6yy4 coloured by chain, ensemble of 20 models, top view.
Source organism: synthetic construct
Primary publication:
Overlapping but distinct: a new model for G-quadruplex biochemical specificity.
Volek M, Kolesnikova S, Svehlova K, Srb P, Sgallová R, Streckerová T, Redondo JA, Veverka V, Curtis EA
OpenAccess logo Nucleic Acids Res 49 1816-1827 (2021)
PMID: 33544841

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-121000 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*GP*GP*GP*TP*GP*GP*GP*AP*AP*GP*GP*GP*TP*GP*GP*GP*A)-3') Chain: A
Molecule details ›
Chain: A
Length: 17 nucleotides
Theoretical weight: 5.45 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 43%
Refinement method: DGSA-distance geometry simulated annealing
Expression system: Not provided

Quick links

Citations

2 review citations

Noncanonical DNA structures are drivers of genome evolution.
Makova et al. (2023)
1 more

1 mention without citation

Overlapping but distinct: a new model for G-quadruplex biochemical specificity.
Volek et al. (2021)