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SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2

Source organisms:
Biochemical function: protein binding
Biological process: translation
Cellular component: cytoplasm

Quick links

EC 3.4.19.12: Ubiquitinyl hydrolase 1

Reaction catalysed:
Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).
Systematic name:
-
Alternative Name(s):
  • Ubiquitin C-terminal hydrolase
  • Ubiquitin carboxyl-terminal hydrolase
  • Ubiquitin thiolesterase
  • Yeast ubiquitin hydrolase

EC 4.2.99.18: DNA-(apurinic or apyrimidinic site) lyase

Reaction catalysed:
The C-O-P bond 3' to the apurinic or apyrimidinic site in DNA is broken by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Systematic name:
DNA-(apurinic or apyrimidinic site) 5'-phosphomonoester-lyase
Alternative Name(s):
  • AP endonuclease class I
  • AP lyase
  • AP site-DNA 5'-phosphomonoester-lyase
  • Deoxyribonuclease (apurinic or apyrimidinic)
  • E. coli endonuclease III
  • E.coli endonuclease III
  • Endodeoxyribonuclease (apurinic or apyrimidinic)
  • Micrococcus luteus UV endonuclease
  • Phage-T(4) UV endonuclease
  • Phage-T4 UV endonuclease
  • X-ray endonuclease III

EC 3.6.5.3: Protein-synthesizing GTPase

Reaction catalysed:
GTP + H(2)O = GDP + phosphate
Systematic name:
GTP phosphohydrolase (mRNA-translation-assisting)
Alternative Name(s):
  • Elongation factor (EF)
  • Initiation factor (IF)
  • Peptide-release factor (RF)
  • Peptide-release or termination factor

EC 3.6.4.13: RNA helicase

Reaction catalysed:
ATP + H(2)O = ADP + phosphate
Systematic name:
ATP phosphohydrolase (RNA helix unwinding)
Alternative Name(s):
  • CSFV NS3 helicase
  • DBP2
  • DDX17
  • DDX25
  • DDX3
  • DDX3X
  • DDX3Y
  • DDX4
  • DDX5
  • DEAD-box RNA helicase
  • DEAD-box protein DED1
  • DEAH-box RNA helicase
  • DEAH-box protein 2
  • DED1
  • DbpA
  • Dex(H/D) RNA helicase
  • EIF4A helicase
  • EhDEAD1
  • EhDEAD1 RNA helicase
  • GRTH/DDX25
  • KOKV helicase
  • Mtr4p
  • NPH-II
  • Nonstructural protein 3 helicase
  • RHA
  • RNA helicase A
  • RNA helicase DDX3
  • RNA helicase Hera
  • RNA-dependent ATPase
  • TGBp1 NTPase/helicase domain
  • VRH1

EC 3.6.4.12: DNA helicase

Reaction catalysed:
ATP + H(2)O = ADP + phosphate
Systematic name:
ATP phosphohydrolase (DNA helix unwinding)
Alternative Name(s):
  • 3' to 5' DNA helicase
  • 3'-5' DNA helicase
  • 3'-5' PfDH
  • 5' to 3' DNA helicase
  • AvDH1
  • BACH1 helicase
  • BLM protein
  • BRCA1-associated C-terminal helicase
  • BcMCM
  • CeWRN-1
  • DNA helicase 120
  • DNA helicase A
  • DNA helicase E
  • DNA helicase II
  • DNA helicase III
  • DNA helicase RECQL5'
  • DNA helicase VI
  • Dbp9p
  • DmRECQ5
  • DnaB
  • DnaB helicase E1
  • HHcsA
  • HPif1
  • Hel E
  • Helicase DnaB
  • Helicase HDH IV
  • Helicase domain of bacteriophage T7 gene 4 protein helicase
  • Hmi1p
  • MCM helicase
  • MCM protein
  • MER3 helicase
  • MER3 protein
  • MPH1
  • PDH120
  • PIF1
  • PcrA
  • PcrA helicase
  • PfDH A
  • Pfh1p
  • UvrD

EC 3.4.22.69: SARS coronavirus main proteinase

Reaction catalysed:
TSAVLQ-|-SGFRK-NH(2) and SGVTFQ-|-GKFKK the two peptides corresponding to the two self-cleavage sites of the SARS 3C-like proteinase are the two most reactive peptide substrates. The enzyme exhibits a strong preference for substrates containing Gln at P1 position and Leu at P2 position.
Systematic name:
-
Alternative Name(s):
  • 3C-like protease
  • 3cLpro
  • Coronavirus 3C-like protease
  • Mpro
  • SARS 3C-like protease
  • SARS coronavirus 3CL protease
  • SARS coronavirus main peptidase
  • SARS coronavirus main protease
  • SARS-CoV 3CLpro enzyme
  • SARS-CoV Mpro
  • SARS-CoV main protease
  • Severe acute respiratory syndrome coronavirus main protease

EC 2.7.7.50: mRNA guanylyltransferase

Reaction catalysed:
GTP + a 5'-diphospho-[mRNA] = diphosphate + a 5'-(5'-triphosphoguanosine)-[mRNA]
Systematic name:
GTP:mRNA guanylyltransferase
Alternative Name(s):
  • GTP--RNA guanylyltransferase
  • Messenger RNA guanylyltransferase
  • Protein lambda-2
  • mRNA capping enzyme

EC 2.7.7.48: RNA-directed RNA polymerase

Reaction catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Systematic name:
Nucleoside-triphosphate:RNA nucleotidyltransferase (RNA-directed)
Alternative Name(s):
  • 3D polymerase
  • PB1 proteins
  • PB2 proteins
  • Phage f2 replicase
  • Polymerase L
  • Q-beta replicase
  • RDRP
  • RNA nucleotidyltransferase (RNA-directed)
  • RNA replicase
  • RNA synthetase
  • RNA transcriptase
  • RNA-dependent RNA polymerase
  • RNA-dependent RNA replicase
  • RNA-dependent ribonucleate nucleotidyltransferase
  • Ribonucleic acid replicase
  • Ribonucleic acid-dependent ribonucleate nucleotidyltransferase
  • Ribonucleic acid-dependent ribonucleic acid polymerase
  • Ribonucleic replicase
  • Ribonucleic synthetase
  • Transcriptase

EC 2.1.1.57: Methyltransferase cap1

Reaction catalysed:
S-adenosyl-L-methionine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(ribonucleotide)-[mRNA] = S-adenosyl-L-homocysteine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-(2'-O-methyl-ribonucleotide)-[mRNA]
Systematic name:
S-adenosyl-L-methionine:5'-(N(7)-methyl 5'-triphosphoguanosine)-(ribonucleotide)-[mRNA] 2-O-methyltransferase
Alternative Name(s):
  • Cap1-MTase
  • MTR1
  • Messenger RNA (nucleoside-2'-)-methyltransferase
  • Messenger ribonucleate nucleoside 2'-methyltransferase
  • S-adenosyl-L-methionine:mRNA (nucleoside-2'-O)-methyltransferase
  • mRNA (nucleoside-2'-O)-methyltransferase

EC 2.1.1.56: mRNA (guanine-N(7))-methyltransferase

Reaction catalysed:
S-adenosyl-L-methionine + a 5'-(5'-triphosphoguanosine)-[mRNA] = S-adenosyl-L-homocysteine + a 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA]
Systematic name:
S-adenosyl-L-methionine:mRNA (guanine-N(7))-methyltransferase
Alternative Name(s):
  • Guanine-7-methyltransferase
  • Messenger RNA guanine 7-methyltransferase
  • Messenger ribonucleate guanine 7-methyltransferase
  • S-adenosyl-L-methionine:mRNA (guanine-7-N)-methyltransferase

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00400
Domain description: WD domain, G-beta repeat
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit I
  2. Small ribosomal subunit protein RACK1
The deposited structure of PDB entry 6zp4 contains 7 copies of Pfam domain PF00400 (WD domain, G-beta repeat) in Small ribosomal subunit protein RACK1. Showing 7 copies in chain GA [auth V].
The deposited structure of PDB entry 6zp4 contains 3 copies of Pfam domain PF00400 (WD domain, G-beta repeat) in Eukaryotic translation initiation factor 3 subunit I. Showing 3 copies in chain KA [auth I].

PF01399
Domain description: PCI domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit A
  2. Eukaryotic translation initiation factor 3 subunit C
  3. Eukaryotic translation initiation factor 3 subunit E
  4. Eukaryotic translation initiation factor 3 subunit M
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01399 (PCI domain) in Eukaryotic translation initiation factor 3 subunit A. Showing 1 copy in chain MA [auth A].
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01399 (PCI domain) in Eukaryotic translation initiation factor 3 subunit C. Showing 1 copy in chain NA [auth C].
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01399 (PCI domain) in Eukaryotic translation initiation factor 3 subunit E. Showing 1 copy in chain OA [auth E].
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01399 (PCI domain) in Eukaryotic translation initiation factor 3 subunit M. Showing 1 copy in chain TA [auth M].

PF00318
Domain description: Ribosomal protein S2
Occurring in:
  1. Small ribosomal subunit protein uS2
The deposited structure of PDB entry 6zp4 contains 2 copies of Pfam domain PF00318 (Ribosomal protein S2) in Small ribosomal subunit protein uS2. Showing 2 copies in chain A [auth a].

PF01398
Domain description: JAB1/Mov34/MPN/PAD-1 ubiquitin protease
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit F
  2. Eukaryotic translation initiation factor 3 subunit H
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01398 (JAB1/Mov34/MPN/PAD-1 ubiquitin protease) in Eukaryotic translation initiation factor 3 subunit F. Showing 1 copy in chain PA [auth F].
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01398 (JAB1/Mov34/MPN/PAD-1 ubiquitin protease) in Eukaryotic translation initiation factor 3 subunit H. Showing 1 copy in chain QA [auth H].

PF01282
Domain description: Ribosomal protein S24e
Occurring in:
  1. Small ribosomal subunit protein eS24
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01282 (Ribosomal protein S24e) in Small ribosomal subunit protein eS24. Showing 1 copy in chain O [auth z].

PF01249
Domain description: Ribosomal protein S21e
Occurring in:
  1. Small ribosomal subunit protein eS21
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01249 (Ribosomal protein S21e ) in Small ribosomal subunit protein eS21. Showing 1 copy in chain M [auth y].

PF01090
Domain description: Ribosomal protein S19e
Occurring in:
  1. Small ribosomal subunit protein eS19
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01090 (Ribosomal protein S19e) in Small ribosomal subunit protein eS19. Showing 1 copy in chain AA [auth x].

PF00833
Domain description: Ribosomal S17
Occurring in:
  1. Small ribosomal subunit protein eS17
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00833 (Ribosomal S17) in Small ribosomal subunit protein eS17. Showing 1 copy in chain S [auth w].

PF01248
Domain description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Occurring in:
  1. Small ribosomal subunit protein eS12
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in Small ribosomal subunit protein eS12. Showing 1 copy in chain W [auth v].

PF03501
Domain description: Plectin/S10 domain
Occurring in:
  1. Small ribosomal subunit protein eS10
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF03501 (Plectin/S10 domain) in Small ribosomal subunit protein eS10. Showing 1 copy in chain V [auth u].

PF01201
Domain description: Ribosomal protein S8e
Occurring in:
  1. Small ribosomal subunit protein eS8
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01201 (Ribosomal protein S8e) in Small ribosomal subunit protein eS8. Showing 1 copy in chain I [auth t].

PF01251
Domain description: Ribosomal protein S7e
Occurring in:
  1. Small ribosomal subunit protein eS7
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01251 (Ribosomal protein S7e) in Small ribosomal subunit protein eS7. Showing 1 copy in chain H [auth s].

PF01092
Domain description: Ribosomal protein S6e
Occurring in:
  1. Small ribosomal subunit protein eS6
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01092 (Ribosomal protein S6e) in Small ribosomal subunit protein eS6. Showing 1 copy in chain G [auth r].

PF16121
Domain description: 40S ribosomal protein S4 C-terminus
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF16121 (40S ribosomal protein S4 C-terminus) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain E [auth q].

PF00467
Domain description: KOW motif
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00467 (KOW motif) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain E [auth q].

PF00900
Domain description: Ribosomal family S4e
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00900 (Ribosomal family S4e) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain E [auth q].

PF08071
Domain description: RS4NT (NUC023) domain
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF08071 (RS4NT (NUC023) domain) in Small ribosomal subunit protein eS4, X isoform. Showing 1 copy in chain E [auth q].

PF01015
Domain description: Ribosomal S3Ae family
Occurring in:
  1. Small ribosomal subunit protein eS1
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01015 (Ribosomal S3Ae family) in Small ribosomal subunit protein eS1. Showing 1 copy in chain B [auth p].

PF00203
Domain description: Ribosomal protein S19
Occurring in:
  1. Small ribosomal subunit protein uS19
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00203 (Ribosomal protein S19) in Small ribosomal subunit protein uS19. Showing 1 copy in chain X [auth o].

PF00366
Domain description: Ribosomal protein S17
Occurring in:
  1. Small ribosomal subunit protein uS17
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00366 (Ribosomal protein S17) in Small ribosomal subunit protein uS17. Showing 1 copy in chain K [auth n].

PF16205
Domain description: Ribosomal_S17 N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS17
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF16205 (Ribosomal_S17 N-terminal) in Small ribosomal subunit protein uS17. Showing 1 copy in chain K [auth n].

PF00312
Domain description: Ribosomal protein S15
Occurring in:
  1. Small ribosomal subunit protein uS15
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00312 (Ribosomal protein S15) in Small ribosomal subunit protein uS15. Showing 1 copy in chain L [auth m].

PF08069
Domain description: Ribosomal S13/S15 N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS15
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF08069 (Ribosomal S13/S15 N-terminal domain) in Small ribosomal subunit protein uS15. Showing 1 copy in chain L [auth m].

PF00253
Domain description: Ribosomal protein S14p/S29e
Occurring in:
  1. Small ribosomal subunit protein uS14
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00253 (Ribosomal protein S14p/S29e) in Small ribosomal subunit protein uS14. Showing 1 copy in chain EA [auth l].

PF00416
Domain description: Ribosomal protein S13/S18
Occurring in:
  1. Small ribosomal subunit protein uS13
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00416 (Ribosomal protein S13/S18) in Small ribosomal subunit protein uS13. Showing 1 copy in chain Z [auth k].

PF00164
Domain description: Ribosomal protein S12/S23
Occurring in:
  1. Small ribosomal subunit protein uS12
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00164 (Ribosomal protein S12/S23) in Small ribosomal subunit protein uS12. Showing 1 copy in chain IA [auth j].

PF00411
Domain description: Ribosomal protein S11
Occurring in:
  1. Small ribosomal subunit protein uS11
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00411 (Ribosomal protein S11) in Small ribosomal subunit protein uS11. Showing 1 copy in chain HA [auth i].

PF00338
Domain description: Ribosomal protein S10p/S20e
Occurring in:
  1. Small ribosomal subunit protein uS10
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00338 (Ribosomal protein S10p/S20e) in Small ribosomal subunit protein uS10. Showing 1 copy in chain BA [auth h].

PF00380
Domain description: Ribosomal protein S9/S16
Occurring in:
  1. Small ribosomal subunit protein uS9
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00380 (Ribosomal protein S9/S16) in Small ribosomal subunit protein uS9. Showing 1 copy in chain Y [auth g].

PF00177
Domain description: Ribosomal protein S7p/S5e
Occurring in:
  1. Small ribosomal subunit protein uS7
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00177 (Ribosomal protein S7p/S5e) in Small ribosomal subunit protein uS7. Showing 1 copy in chain U [auth e].

PF03719
Domain description: Ribosomal protein S5, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS5
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF03719 (Ribosomal protein S5, C-terminal domain) in Small ribosomal subunit protein uS5. Showing 1 copy in chain C [auth d].

PF00333
Domain description: Ribosomal protein S5, N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS5
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00333 (Ribosomal protein S5, N-terminal domain) in Small ribosomal subunit protein uS5. Showing 1 copy in chain C [auth d].

PF01479
Domain description: S4 domain
Occurring in:
  1. Small ribosomal subunit protein uS4
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01479 (S4 domain) in Small ribosomal subunit protein uS4. Showing 1 copy in chain J [auth c].

PF00163
Domain description: Ribosomal protein S4/S9 N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS4
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00163 (Ribosomal protein S4/S9 N-terminal domain) in Small ribosomal subunit protein uS4. Showing 1 copy in chain J [auth c].

PF00189
Domain description: Ribosomal protein S3, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS3
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00189 (Ribosomal protein S3, C-terminal domain) in Small ribosomal subunit protein uS3. Showing 1 copy in chain T [auth b].

PF07650
Domain description: KH domain
Occurring in:
  1. Small ribosomal subunit protein uS3
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF07650 (KH domain) in Small ribosomal subunit protein uS3. Showing 1 copy in chain T [auth b].

PF16122
Domain description: 40S ribosomal protein SA C-terminus
Occurring in:
  1. Small ribosomal subunit protein uS2
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF16122 (40S ribosomal protein SA C-terminus) in Small ribosomal subunit protein uS2. Showing 1 copy in chain A [auth a].

PF01253
Domain description: Translation initiation factor SUI1
Occurring in:
  1. Eukaryotic translation initiation factor 1
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01253 (Translation initiation factor SUI1) in Eukaryotic translation initiation factor 1. Showing 1 copy in chain AB [auth Z].

PF09173
Domain description: Initiation factor eIF2 gamma, C terminal
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF09173 (Initiation factor eIF2 gamma, C terminal) in Eukaryotic translation initiation factor 2 subunit 3. Showing 1 copy in chain ZA [auth Y].

PF03144
Domain description: Elongation factor Tu domain 2
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF03144 (Elongation factor Tu domain 2) in Eukaryotic translation initiation factor 2 subunit 3. Showing 1 copy in chain ZA [auth Y].

PF00009
Domain description: Elongation factor Tu GTP binding domain
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00009 (Elongation factor Tu GTP binding domain) in Eukaryotic translation initiation factor 2 subunit 3. Showing 1 copy in chain ZA [auth Y].

PF05162
Domain description: Ribosomal protein L41
Occurring in:
  1. Small ribosomal subunit protein eS32
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF05162 (Ribosomal protein L41) in Small ribosomal subunit protein eS32. Showing 1 copy in chain F [auth W].

PF01599
Domain description: Ribosomal protein S27a
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01599 (Ribosomal protein S27a) in Ubiquitin-ribosomal protein eS31 fusion protein. Showing 1 copy in chain FA [auth U].

PF00240
Domain description: Ubiquitin family
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00240 (Ubiquitin family) in Ubiquitin-ribosomal protein eS31 fusion protein. Showing 1 copy in chain FA [auth U] (this domain is out of the observed residue ranges!).

PF04758
Domain description: Ribosomal protein S30
Occurring in:
  1. Small ribosomal subunit protein eS30
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF04758 (Ribosomal protein S30) in Small ribosomal subunit protein eS30. Showing 1 copy in chain Q [auth T].

PF01200
Domain description: Ribosomal protein S28e
Occurring in:
  1. Small ribosomal subunit protein eS28
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01200 (Ribosomal protein S28e) in Small ribosomal subunit protein eS28. Showing 1 copy in chain DA [auth S].

PF01667
Domain description: Ribosomal protein S27
Occurring in:
  1. Small ribosomal subunit protein eS27
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01667 (Ribosomal protein S27) in Small ribosomal subunit protein eS27. Showing 1 copy in chain P [auth R].

PF01283
Domain description: Ribosomal protein S26e
Occurring in:
  1. Small ribosomal subunit protein eS26
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01283 (Ribosomal protein S26e) in Small ribosomal subunit protein eS26. Showing 1 copy in chain D [auth Q].

PF03297
Domain description: S25 ribosomal protein
Occurring in:
  1. Small ribosomal subunit protein eS25
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF03297 (S25 ribosomal protein) in Small ribosomal subunit protein eS25. Showing 1 copy in chain CA [auth P].

PF07541
Domain description: Eukaryotic translation initiation factor 2 alpha subunit
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 1
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF07541 (Eukaryotic translation initiation factor 2 alpha subunit) in Eukaryotic translation initiation factor 2 subunit 1. Showing 1 copy in chain YA [auth O].

PF00575
Domain description: S1 RNA binding domain
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 1
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00575 (S1 RNA binding domain) in Eukaryotic translation initiation factor 2 subunit 1. Showing 1 copy in chain YA [auth O].

PF05091
Domain description: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit D
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF05091 (Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)) in Eukaryotic translation initiation factor 3 subunit D. Showing 1 copy in chain UA [auth N].

PF18005
Domain description: eIF3 subunit M, C-terminal helix
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit M
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF18005 (eIF3 subunit M, C-terminal helix) in Eukaryotic translation initiation factor 3 subunit M. Showing 1 copy in chain TA [auth M].

PF10255
Domain description: RNA polymerase I-associated factor PAF67
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit L
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF10255 (RNA polymerase I-associated factor PAF67) in Eukaryotic translation initiation factor 3 subunit L. Showing 1 copy in chain SA [auth L].

PF10075
Domain description: CSN8/PSMD8/EIF3K family
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit K
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF10075 (CSN8/PSMD8/EIF3K family) in Eukaryotic translation initiation factor 3 subunit K. Showing 1 copy in chain RA [auth K].

PF11501
Domain description: Betacoronavirus replicase NSP1
Occurring in:
  1. Host translation inhibitor nsp1
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF11501 (Betacoronavirus replicase NSP1) in Host translation inhibitor nsp1. Showing 1 copy in chain BB [auth J] (this domain is out of the observed residue ranges!).

PF12894
Domain description: Anaphase-promoting complex subunit 4 WD40 domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit I
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF12894 (Anaphase-promoting complex subunit 4 WD40 domain) in Eukaryotic translation initiation factor 3 subunit I. Showing 1 copy in chain KA [auth I].

PF19445
Domain description: C-terminal region of eIF3h
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit H
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF19445 (C-terminal region of eIF3h) in Eukaryotic translation initiation factor 3 subunit H. Showing 1 copy in chain QA [auth H].

PF01176
Domain description: Translation initiation factor 1A / IF-1
Occurring in:
  1. Eukaryotic translation initiation factor 1A, X-chromosomal
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01176 (Translation initiation factor 1A / IF-1) in Eukaryotic translation initiation factor 1A, X-chromosomal. Showing 1 copy in chain JA [auth G].

PF13012
Domain description: Maintenance of mitochondrial structure and function
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit F
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF13012 (Maintenance of mitochondrial structure and function) in Eukaryotic translation initiation factor 3 subunit F. Showing 1 copy in chain PA [auth F].

PF21357
Domain description: Eukaryotic translation initiation factor 3 subunit E, C-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit E
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF21357 (Eukaryotic translation initiation factor 3 subunit E, C-terminal) in Eukaryotic translation initiation factor 3 subunit E. Showing 1 copy in chain OA [auth E].

PF09440
Domain description: eIF3 subunit 6 N terminal domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit E
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF09440 (eIF3 subunit 6 N terminal domain) in Eukaryotic translation initiation factor 3 subunit E. Showing 1 copy in chain OA [auth E].

PF00410
Domain description: Ribosomal protein S8
Occurring in:
  1. Small ribosomal subunit protein uS8
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00410 (Ribosomal protein S8) in Small ribosomal subunit protein uS8. Showing 1 copy in chain N [auth D].

PF05470
Domain description: Eukaryotic translation initiation factor 3 subunit 8 N-terminus
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit C
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF05470 (Eukaryotic translation initiation factor 3 subunit 8 N-terminus) in Eukaryotic translation initiation factor 3 subunit C. Showing 1 copy in chain NA [auth C].

PF08662
Domain description: Eukaryotic translation initiation factor eIF2A
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF08662 (Eukaryotic translation initiation factor eIF2A) in Eukaryotic translation initiation factor 3 subunit B. Showing 1 copy in chain LA [auth B].

PF00076
Domain description: RNA recognition motif
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF00076 (RNA recognition motif) in Eukaryotic translation initiation factor 3 subunit B. Showing 1 copy in chain LA [auth B].

PF22591
Domain description: eIF3a, PCI domain, TPR-like region
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit A

PF01873
Domain description: Domain found in IF2B/IF5
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 2
The deposited structure of PDB entry 6zp4 contains 1 copy of Pfam domain PF01873 (Domain found in IF2B/IF5) in Eukaryotic translation initiation factor 2 subunit 2. Showing 1 copy in chain XA [auth 4].

Rfam RNA families (Rfam)
RF00005
Domain description: tRNA
Occurring in:
  1. tRNA
The deposited structure of PDB entry 6zp4 contains 1 copy of Rfam domain RF00005 (tRNA) in tRNA. Showing 1 copy in chain WA [auth 1].

RF01960
Domain description: Eukaryotic small subunit ribosomal RNA
Occurring in:
  1. 18S Ribosomal RNA
The deposited structure of PDB entry 6zp4 contains 1 copy of Rfam domain RF01960 (Eukaryotic small subunit ribosomal RNA) in 18S Ribosomal RNA. Showing 1 copy in chain R [auth 2].

InterPro InterPro annotations
IPR001680
Domain description: WD40 repeat
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit I
  2. Small ribosomal subunit protein RACK1
IPR000717
Domain description: Proteasome component (PCI) domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit A
  2. Eukaryotic translation initiation factor 3 subunit C
  3. Eukaryotic translation initiation factor 3 subunit E
  4. Eukaryotic translation initiation factor 3 subunit K
  5. Eukaryotic translation initiation factor 3 subunit L
  6. Eukaryotic translation initiation factor 3 subunit M
IPR001865
Domain description: Small ribosomal subunit protein uS2
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR012340
Domain description: Nucleic acid-binding, OB-fold
Occurring in:
  1. Eukaryotic translation initiation factor 1A, X-chromosomal
  2. Eukaryotic translation initiation factor 2 subunit 1
  3. Small ribosomal subunit protein eS28
  4. Small ribosomal subunit protein uS12
  5. Small ribosomal subunit protein uS17
IPR002222
Domain description: Small ribosomal subunit protein uS19
Occurring in:
  1. Small ribosomal subunit protein uS19
IPR000795
Domain description: Translational (tr)-type GTP-binding domain
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
IPR000266
Domain description: Small ribosomal subunit protein uS17
Occurring in:
  1. Small ribosomal subunit protein uS17
IPR001848
Domain description: Small ribosomal subunit protein uS10
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR001253
Domain description: Translation initiation factor 1A (eIF-1A)
Occurring in:
  1. Eukaryotic translation initiation factor 1A, X-chromosomal
IPR036390
Domain description: Winged helix DNA-binding domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit C
  2. Eukaryotic translation initiation factor 3 subunit E
  3. Eukaryotic translation initiation factor 3 subunit K
  4. Eukaryotic translation initiation factor 3 subunit M
  5. Small ribosomal subunit protein eS19
IPR036388
Domain description: Winged helix-like DNA-binding domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit C
  2. Eukaryotic translation initiation factor 3 subunit K
  3. Small ribosomal subunit protein eS25
  4. Small ribosomal subunit protein eS10
  5. Small ribosomal subunit protein eS19
IPR000530
Domain description: Small ribosomal subunit protein eS12
Occurring in:
  1. Small ribosomal subunit protein eS12
IPR000589
Domain description: Small ribosomal subunit protein uS15
Occurring in:
  1. Small ribosomal subunit protein uS15
IPR001892
Domain description: Small ribosomal subunit protein uS13
Occurring in:
  1. Small ribosomal subunit protein uS13
IPR006032
Domain description: Small ribosomal subunit protein uS12
Occurring in:
  1. Small ribosomal subunit protein uS12
IPR001971
Domain description: Small ribosomal subunit protein uS11
Occurring in:
  1. Small ribosomal subunit protein uS11
IPR002942
Domain description: RNA-binding S4 domain
Occurring in:
  1. Small ribosomal subunit protein uS4
  2. Small ribosomal subunit protein eS4, X isoform
IPR000289
Domain description: Small ribosomal subunit protein eS28
Occurring in:
  1. Small ribosomal subunit protein eS28
IPR000592
Domain description: Small ribosomal subunit protein eS27
Occurring in:
  1. Small ribosomal subunit protein eS27
IPR007783
Domain description: Eukaryotic translation initiation factor 3 subunit D
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit D
IPR019775
Domain description: WD40 repeat, conserved site
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit I
  2. Small ribosomal subunit protein RACK1
IPR000555
Domain description: JAB1/MPN/MOV34 metalloenzyme domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit F
  2. Eukaryotic translation initiation factor 3 subunit H
IPR016650
Domain description: Eukaryotic translation initiation factor 3 subunit E
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit E
IPR015943
Domain description: WD40/YVTN repeat-like-containing domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
  2. Eukaryotic translation initiation factor 3 subunit I
  3. Small ribosomal subunit protein RACK1
IPR001976
Domain description: Small ribosomal subunit protein eS24
Occurring in:
  1. Small ribosomal subunit protein eS24
IPR001931
Domain description: Small ribosomal subunit protein eS21
Occurring in:
  1. Small ribosomal subunit protein eS21
IPR001266
Domain description: Small ribosomal subunit protein eS19
Occurring in:
  1. Small ribosomal subunit protein eS19
IPR001210
Domain description: Small ribosomal subunit protein eS17
Occurring in:
  1. Small ribosomal subunit protein eS17
IPR000876
Domain description: Small ribosomal subunit protein eS4
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR005874
Domain description: Eukaryotic translation initiation factor SUI1
Occurring in:
  1. Eukaryotic translation initiation factor 1
IPR000104
Domain description: Antifreeze protein, type I
Occurring in:
  1. Unknown factor
IPR020472
Domain description: G-protein beta WD-40 repeat
Occurring in:
  1. Small ribosomal subunit protein RACK1
IPR019956
Domain description: Ubiquitin domain
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR000626
Domain description: Ubiquitin-like domain
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR019382
Domain description: Translation initiation factor 3 complex subunit L
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit L
IPR000630
Domain description: Small ribosomal subunit protein uS8
Occurring in:
  1. Small ribosomal subunit protein uS8
IPR000504
Domain description: RNA recognition motif domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
IPR011400
Domain description: Eukaryotic translation initiation factor 3 subunit B
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
IPR029064
Domain description: Ribosomal protein eL30-like superfamily
Occurring in:
  1. Small ribosomal subunit protein eS12
IPR001047
Domain description: Small ribosomal subunit protein eS8
Occurring in:
  1. Small ribosomal subunit protein eS8
IPR000554
Domain description: Small ribosomal subunit protein eS7
Occurring in:
  1. Small ribosomal subunit protein eS7
IPR001377
Domain description: Small ribosomal subunit protein eS6
Occurring in:
  1. Small ribosomal subunit protein eS6
IPR001593
Domain description: Small ribosomal subunit protein eS1
Occurring in:
  1. Small ribosomal subunit protein eS1
IPR023575
Domain description: Small ribosomal subunit protein uS19, superfamily
Occurring in:
  1. Small ribosomal subunit protein uS19
IPR023029
Domain description: Small ribosomal subunit protein uS15, archaea/eukaryotes
Occurring in:
  1. Small ribosomal subunit protein uS15
IPR005680
Domain description: Small ribosomal subunit protein uS12, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS12
IPR036838
Domain description: Small ribosomal subunit protein uS10 domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR000754
Domain description: Small ribosomal subunit protein uS9
Occurring in:
  1. Small ribosomal subunit protein uS9
IPR005716
Domain description: Ribosomal protein uS7, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR036823
Domain description: Small ribosomal subunit protein uS7 domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR000235
Domain description: Small ribosomal subunit protein uS7
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR020568
Domain description: Ribosomal protein uS5 domain 2-type superfamily
Occurring in:
  1. Small ribosomal subunit protein uS5
  2. Small ribosomal subunit protein uS9
IPR014721
Domain description: Small ribosomal subunit protein uS5 domain 2-type fold, subgroup
Occurring in:
  1. Small ribosomal subunit protein uS5
  2. Small ribosomal subunit protein uS9
IPR013810
Domain description: Small ribosomal subunit protein uS5, N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR036986
Domain description: RNA-binding S4 domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS4
  2. Small ribosomal subunit protein eS4, X isoform
IPR001912
Domain description: Small ribosomal subunit protein uS4, N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS4
IPR036419
Domain description: Ribosomal protein S3, C-terminal domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR004044
Domain description: K Homology domain, type 2
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR018130
Domain description: Small ribosomal subunit protein uS2, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR005707
Domain description: Small ribosomal subunit protein uS2, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR001950
Domain description: SUI1 domain
Occurring in:
  1. Eukaryotic translation initiation factor 1
IPR015256
Domain description: Initiation factor eIF2 gamma, C-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
IPR027417
Domain description: P-loop containing nucleoside triphosphate hydrolase
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
IPR011332
Domain description: Zinc-binding ribosomal protein
Occurring in:
  1. Small ribosomal subunit protein eS27
  2. Ubiquitin-ribosomal protein eS31 fusion protein
IPR000892
Domain description: Small ribosomal subunit protein eS26
Occurring in:
  1. Small ribosomal subunit protein eS26
IPR004977
Domain description: Small ribosomal subunit protein eS25
Occurring in:
  1. Small ribosomal subunit protein eS25
IPR024055
Domain description: Translation initiation factor 2, alpha subunit, C-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 1
IPR024054
Domain description: Translation initiation factor 2, alpha subunit, middle domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 1
IPR003029
Domain description: S1 domain
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 1
IPR011488
Domain description: Translation initiation factor 2, alpha subunit
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 1
IPR016024
Domain description: Armadillo-type fold
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit K
  2. Eukaryotic translation initiation factor 3 subunit M
IPR009374
Domain description: Eukaryotic translation initiation factor 3 subunit K
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit K
IPR036322
Domain description: WD40-repeat-containing domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit I
  2. Small ribosomal subunit protein RACK1
IPR027524
Domain description: Eukaryotic translation initiation factor 3 subunit H
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit H
IPR006196
Domain description: RNA-binding domain, S1, IF1 type
Occurring in:
  1. Eukaryotic translation initiation factor 1A, X-chromosomal
IPR037518
Domain description: MPN domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit F
  2. Eukaryotic translation initiation factor 3 subunit H
IPR027531
Domain description: Eukaryotic translation initiation factor 3 subunit F
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit F
IPR027516
Domain description: Eukaryotic translation initiation factor 3 subunit C
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit C
IPR027512
Domain description: Eukaryotic translation initiation factor 3 subunit A
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit A
IPR002735
Domain description: Translation initiation factor IF2/IF5 domain
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 2
IPR018098
Domain description: Small ribosomal subunit protein eS24 conserved site
Occurring in:
  1. Small ribosomal subunit protein eS24
IPR012678
Domain description: Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS24
IPR018279
Domain description: Small ribosomal subunit protein eS21, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS21
IPR038579
Domain description: Small ribosomal subunit protein eS21 superfamily
Occurring in:
  1. Small ribosomal subunit protein eS21
IPR018277
Domain description: Small ribosomal subunit protein eS19, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS19
IPR018273
Domain description: Small ribosomal subunit protein eS17, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS17
IPR036401
Domain description: Small ribosomal subunit protein eS17 superfamily
Occurring in:
  1. Small ribosomal subunit protein eS17
IPR047860
Domain description: Small ribosomal subunit protein eS12, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS12
IPR004038
Domain description: Ribosomal protein eL8/eL30/eS12/Gadd45
Occurring in:
  1. Small ribosomal subunit protein eS12
IPR005326
Domain description: Plectin/eS10, N-terminal
Occurring in:
  1. Small ribosomal subunit protein eS10
IPR037447
Domain description: Small ribosomal subunit protein eS10
Occurring in:
  1. Small ribosomal subunit protein eS10
IPR042563
Domain description: Small ribosomal subunit protein eS8 subdomain, eukaryotes
Occurring in:
  1. Small ribosomal subunit protein eS8
IPR018283
Domain description: Small ribosomal subunit protein eS8, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS8
IPR022309
Domain description: Ribosomal protein eS8/ribosomal biogenesis NSA2
Occurring in:
  1. Small ribosomal subunit protein eS8
IPR047861
Domain description: Small ribosomal subunit protein eS7, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS7
IPR018282
Domain description: Small ribosomal subunit protein eS6, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS6
IPR014401
Domain description: Small ribosomal subunit protein eS6-like
Occurring in:
  1. Small ribosomal subunit protein eS6
IPR032277
Domain description: Small ribosomal subunit protein eS4, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR005824
Domain description: KOW
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR041982
Domain description: Small ribosomal subunit protein eS4, KOW domain
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR014722
Domain description: Large ribosomal subunit protein uL2, domain 2
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR038237
Domain description: Small ribosomal subunit protein eS4, central domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR013845
Domain description: Small ribosomal subunit protein eS4, central region
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR018199
Domain description: Small ribosomal subunit protein eS4, N-terminal, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR013843
Domain description: Small ribosomal subunit protein eS4, N-terminal
Occurring in:
  1. Small ribosomal subunit protein eS4, X isoform
IPR018281
Domain description: Small ribosomal subunit protein eS1, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS1
IPR027500
Domain description: Small ribosomal subunit protein eS1, eukaryotes
Occurring in:
  1. Small ribosomal subunit protein eS1
IPR020934
Domain description: Small ribosomal subunit protein uS19, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS19
IPR005713
Domain description: Small ribosomal subunit protein uS19, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS19
IPR019979
Domain description: Small ribosomal subunit protein uS17, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS17
IPR028333
Domain description: Small ribosomal subunit protein uS17, archaeal/eukaryotic
Occurring in:
  1. Small ribosomal subunit protein uS17
IPR032440
Domain description: Small ribosomal subunit protein uS17, N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS17
IPR009068
Domain description: uS15/NS1, RNA-binding domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS15
IPR012606
Domain description: Small ribosomal subunit protein uS15, N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS15
IPR018271
Domain description: Small ribosomal subunit protein uS14, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS14
IPR001209
Domain description: Small ribosomal subunit protein uS14
Occurring in:
  1. Small ribosomal subunit protein uS14
IPR043140
Domain description: Small ribosomal subunit protein uS14 superfamily
Occurring in:
  1. Small ribosomal subunit protein uS14
IPR039744
Domain description: Small ribosomal subunit protein uS14, eukaryotes/archaea
Occurring in:
  1. Small ribosomal subunit protein uS14
IPR018269
Domain description: Small ribosomal subunit protein uS13, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS13
IPR027437
Domain description: Small ribosomal subunit protein uS13, C-terminal
Occurring in:
  1. Small ribosomal subunit protein uS13
IPR010979
Domain description: Small ribosomal subunit protein uS13-like, H2TH
Occurring in:
  1. Small ribosomal subunit protein uS13
IPR018102
Domain description: Small ribosomal subunit protein uS11, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS11
IPR036967
Domain description: Small ribosomal subunit protein uS11 superfamily
Occurring in:
  1. Small ribosomal subunit protein uS11
IPR018268
Domain description: Small ribosomal subunit protein uS10, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR027486
Domain description: Small ribosomal subunit protein uS10 domain
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR005729
Domain description: Small ribosomal subunit protein uS10, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS10
IPR020574
Domain description: Small ribosomal subunit protein uS9, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS9
IPR020606
Domain description: Small ribosomal subunit protein uS7, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR023798
Domain description: Small ribosomal subunit protein uS7 domain
Occurring in:
  1. Small ribosomal subunit protein uS7
IPR005324
Domain description: Small ribosomal subunit protein uS5, C-terminal
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR018192
Domain description: Small ribosomal subunit protein uS5, N-terminal, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR005711
Domain description: Small ribosomal subunit protein uS5, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR000851
Domain description: Small ribosomal subunit protein uS5
Occurring in:
  1. Small ribosomal subunit protein uS5
IPR018079
Domain description: Small ribosomal subunit protein uS4, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS4
IPR022801
Domain description: Small ribosomal subunit protein uS4
Occurring in:
  1. Small ribosomal subunit protein uS4
IPR005710
Domain description: Small ribosomal subunit protein uS4, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS4
IPR018280
Domain description: Small ribosomal subunit protein uS3, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR001351
Domain description: Small ribosomal subunit protein uS3, C-terminal
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR009019
Domain description: K homology domain superfamily, prokaryotic type
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR005703
Domain description: Small ribosomal subunit protein uS3, eukaryotic/archaeal
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR015946
Domain description: K homology domain-like, alpha/beta
Occurring in:
  1. Small ribosomal subunit protein uS3
IPR032281
Domain description: Small ribosomal subunit protein uS2, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR023591
Domain description: Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR027498
Domain description: Small ribosomal subunit protein uS2, eukaryotic
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR027504
Domain description: Small ribosomal subunit protein uS2, vertebrates
Occurring in:
  1. Small ribosomal subunit protein uS2
IPR036877
Domain description: SUI1 domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 1
IPR009001
Domain description: Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
IPR004161
Domain description: Translation elongation factor EFTu-like, domain 2
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
IPR044127
Domain description: Initiation factor eIF2 gamma, domain 2
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
IPR009000
Domain description: Translation protein, beta-barrel domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
IPR044128
Domain description: Initiation factor eIF2 gamma, GTP-binding domain
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 3
IPR007836
Domain description: Large ribosomal subunit protein eS32
Occurring in:
  1. Small ribosomal subunit protein eS32
IPR045223
Domain description: Small ribosomal subunit protein RACK1-like
Occurring in:
  1. Small ribosomal subunit protein RACK1
IPR002906
Domain description: Small ribosomal subunit protein eS31
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR038582
Domain description: Small ribosomal subunit protein eS31 eukaryotic-type superfamily
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR019954
Domain description: Ubiquitin conserved site
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR029071
Domain description: Ubiquitin-like domain superfamily
Occurring in:
  1. Ubiquitin-ribosomal protein eS31 fusion protein
IPR006846
Domain description: Small ribosomal subunit protein eS30
Occurring in:
  1. Small ribosomal subunit protein eS30
IPR028626
Domain description: Ribosomal protein eS28 conserved site
Occurring in:
  1. Small ribosomal subunit protein eS28
IPR023407
Domain description: Small ribosomal subunit protein eS27, zinc-binding domain superfamily
Occurring in:
  1. Small ribosomal subunit protein eS27
IPR047864
Domain description: Ribosomal protein eS26, conserved site
Occurring in:
  1. Small ribosomal subunit protein eS26
IPR038551
Domain description: Ribosomal protein eS26 superfamily
Occurring in:
  1. Small ribosomal subunit protein eS26
IPR044126
Domain description: IF2a, S1-like domain
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 1
IPR040750
Domain description: eIF3 subunit M, C-terminal helix domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit M
IPR045237
Domain description: Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit M
IPR027528
Domain description: Eukaryotic translation initiation factor 3 subunit M
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit M
IPR011990
Domain description: Tetratricopeptide-like helical domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit L
IPR033464
Domain description: CSN8/PSMD8/EIF3K
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit K
IPR016020
Domain description: Translation initiation factor 3, subunit 12, N-terminal, eukaryotic
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit K
IPR046442
Domain description: NSP1, C-terminal domain, betacoronavirus
Occurring in:
  1. Host translation inhibitor nsp1
IPR038030
Domain description: NSP1 globular domain superfamily, betacoronavirus
Occurring in:
  1. Host translation inhibitor nsp1
IPR046443
Domain description: NSP1, globular domain, alpha/betacoronavirus
Occurring in:
  1. Host translation inhibitor nsp1
IPR021590
Domain description: NSP1, globular domain, betacoronavirus
Occurring in:
  1. Host translation inhibitor nsp1
IPR027525
Domain description: Eukaryotic translation initiation factor 3 subunit I
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit I
IPR045810
Domain description: eIF3h, C-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit H
IPR018104
Domain description: Translation initiation factor 1A (eIF-1A), conserved site
Occurring in:
  1. Eukaryotic translation initiation factor 1A, X-chromosomal
IPR024969
Domain description: EIF3F/CSN6-like, C-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit F
IPR019010
Domain description: Eukaryotic translation initiation factor 3 subunit E, N-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit E
IPR047863
Domain description: Small ribosomal subunit protein uS8, conserved site
Occurring in:
  1. Small ribosomal subunit protein uS8
IPR035987
Domain description: Small ribosomal subunit protein uS8 superfamily
Occurring in:
  1. Small ribosomal subunit protein uS8
IPR008905
Domain description: Eukaryotic translation initiation factor 3 subunit C, N-terminal domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit C
IPR013979
Domain description: Translation initiation factor, beta propellor-like domain
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
IPR035979
Domain description: RNA-binding domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
IPR034363
Domain description: eIF3B, RNA recognition motif
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. Eukaryotic translation initiation factor 3 subunit B
IPR016190
Domain description: Translation initiation factor IF2/IF5, zinc-binding
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 2
IPR016189
Domain description: Translation initiation factor IF2/IF5, N-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 2
IPR045196
Domain description: Translation initiation factor IF2/IF5
Occurring in:
  1. Eukaryotic translation initiation factor 2 subunit 2

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