› 7kd5

X-ray diffraction
1.55Å resolution

Structure of the C-terminal domain of the Menangle virus phosphoprotein (residues 329 -388), fused to MBP. Space group P212121

Released:
DOI: 10.2210/pdb7kd5/pdb
PDB entry 7kd5 coloured by chain, front view.
PDB entry 7kd5 coloured by chain, side view.
PDB entry 7kd5 coloured by chain, top view.
Source organisms:
Primary publication:
Structural Analysis of the Menangle Virus P Protein Reveals a Soft Boundary between Ordered and Disordered Regions.
Webby MN, Herr N, Bulloch EMM, Schmitz M, Keown JR, Goldstone DC, Kingston RL
OpenAccess logo Viruses 13 (2021)
PMID: 34578318

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-105151 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Maltodextrin-binding protein; Phosphoprotein Chain: A
Molecule details ›
Chain: A
Length: 431 amino acids
Theoretical weight: 47.13 KDa
Source organisms: Expression system: Escherichia coli
UniProt:
  • Canonical: A0A4P1LXE0 (Residues: 3-372; Coverage: 79%)
  • Canonical: Q91MK1 (Residues: 329-388; Coverage: 16%)
Gene names: JW3994, V/P, malE
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: GLC
Carbohydrate polymer
3 bound ligands:
Ligand EDO 4 x EDO
Ligand PIN 3 x PIN
Ligand PRO 1 x PRO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU MICROMAX-007 HF
Spacegroup: P212121
Unit cell:
a: 67.617Å b: 77.421Å c: 79.132Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.165 0.164 0.189
Expression system: Escherichia coli

Quick links

Citations

1 mention without citation

Structural Analysis of the Menangle Virus P Protein Reveals a Soft Boundary between Ordered and Disordered Regions.
Webby et al. (2021)