7oao

X-ray diffraction
1.5Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-209869 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Spike protein S1 Chain: EEE
Molecule details ›
Chain: EEE
Length: 210 amino acids
Theoretical weight: 23.72 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 330-532; Coverage: 16%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
C5 nanobody Chain: FFF
Molecule details ›
Chain: FFF
Length: 128 amino acids
Theoretical weight: 13.83 KDa
Source organism: Lama glama
Expression system: Escherichia coli

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: P21212
Unit cell:
a: 71.22Å b: 154.33Å c: 28.82Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.154 0.152 0.186
Expression systems:
  • Homo sapiens
  • Escherichia coli