7qix

Electron Microscopy
2.53Å resolution

Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit.

Released:
Source organism: Solanum lycopersicum
Related structures: EMD-14002

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 22-mer (preferred)
PDBe Complex ID:
PDB-CPX-236677 (preferred)
Entry contents:
21 distinct polypeptide molecules
1 distinct RNA molecule
Macromolecules (22 distinct):
60S ribosomal protein L41 Chain: D
Molecule details ›
Chain: D
Length: 25 amino acids
Theoretical weight: 3.45 KDa
Source organism: Solanum lycopersicum
UniProt:
  • Canonical: K4C3A4 (Residues: 1-25; Coverage: 100%)
Sequence domains: Ribosomal protein L41
Small ribosomal subunit protein uS2 Chain: E
Molecule details ›
Chain: E
Length: 296 amino acids
Theoretical weight: 32.22 KDa
Source organism: Solanum lycopersicum
UniProt:
  • Canonical: A0A3Q7H1U4 (Residues: 1-296; Coverage: 100%)
Sequence domains: Ribosomal protein S2
Small ribosomal subunit protein eS1 Chain: F
40S ribosomal protein S4 Chain: G
40S ribosomal protein S7 Chain: H
40S ribosomal protein S8 Chain: I
CCHC-type domain-containing protein Chain: J
Small ribosomal subunit protein eS17 Chain: K
40S ribosomal protein S21 Chain: L
40S ribosomal protein S23 Chain: M
40S ribosomal protein S26 Chain: N
Small ribosomal subunit protein uS5 Chain: O
40S ribosomal protein S6 Chain: P
40S body ribosomal protein uS4 Chain: Q
Small ribosomal subunit protein uS15 N-terminal domain-containing protein Chain: R
Ribosomal protein S14 Chain: S
40S ribosomal protein S24 Chain: U
40S ribosomal protein S27 Chain: V
40S ribosomal protein S30 Chain: W
Small ribosomal subunit protein uS8c Chain: T
Ribosomal protein L19 Chain: X
18S rRNA body Chain: 2

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
Resolution: 2.53Å
Relevant EMDB volumes: EMD-14002