› 7wsc

Electron Microscopy
3.78Å resolution

Local structure of BD55-3500 and omicron RBD complex

Released:
DOI: 10.2210/pdb7wsc/pdb
PDB entry 7wsc coloured by chain, front view.
PDB entry 7wsc coloured by chain, side view.
PDB entry 7wsc coloured by chain, top view.
Source organisms:
Entry author: Liu PL
Related structures: EMD-32753

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-534991 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (4 distinct):
Spike protein S1 Chain: R
Molecule details ›
Chain: R
Length: 236 amino acids
Theoretical weight: 26.88 KDa
Source organism: Severe acute respiratory syndrome coronavirus
Expression system: Homo sapiens
UniProt:
  • Best match: P0DTC2 (Residues: 319-541)
Gene names: 2, S
3500H Chain: H
Molecule details ›
Chain: H
Length: 127 amino acids
Theoretical weight: 14.48 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
3500L Chain: L
Molecule details ›
Chain: L
Length: 108 amino acids
Theoretical weight: 11.59 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.78Å
Relevant EMDB volumes: EMD-32753
Expression system: Homo sapiens

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