7aso

Electron Microscopy
3.11Å resolution

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Released:
Source organism: Staphylococcus aureus
Entry authors: Cimicata G, Bashan A, Yonath A
Related structures: EMD-11902

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 47-mer (preferred)
PDBe Complex ID:
PDB-CPX-100546 (preferred)
Entry contents:
44 distinct polypeptide molecules
3 distinct RNA molecules
Macromolecules (47 distinct):
Small ribosomal subunit protein uS3 Chain: B
Molecule details ›
Chain: B
Length: 202 amino acids
Theoretical weight: 22.68 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077UU26 (Residues: 2-203; Coverage: 93%)
Gene names: CD116_01830, ERS140147_00632, NCTC13712_02192, rpsC
Sequence domains:
Small ribosomal subunit protein bS6 Chain: E
Molecule details ›
Chain: E
Length: 95 amino acids
Theoretical weight: 11.24 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: W8TPC6 (Residues: 1-95; Coverage: 97%)
Gene names: CD116_05330, ERS140147_02571, NCTC13712_00312, rpsF
Sequence domains: Ribosomal protein S6
Small ribosomal subunit protein uS7 Chain: G
Molecule details ›
Chain: G
Length: 155 amino acids
Theoretical weight: 17.7 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077VHU6 (Residues: 2-156; Coverage: 99%)
Gene names: CD116_12315, ERS140147_01024, NCTC13712_00499, rpsG
Sequence domains: Ribosomal protein S7p/S5e
Small ribosomal subunit protein uS8 Chain: F
Molecule details ›
Chain: F
Length: 130 amino acids
Theoretical weight: 14.62 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: W8U8T8 (Residues: 3-132; Coverage: 99%)
Gene names: CD116_01870, ERS140147_00624, NCTC13712_02184, rpsH
Sequence domains: Ribosomal protein S8
Small ribosomal subunit protein uS9 Chain: H
Molecule details ›
Chain: H
Length: 127 amino acids
Theoretical weight: 14.31 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A1Q4GY48 (Residues: 4-130; Coverage: 98%)
Gene names: AS572_10930, C0100_001260, CFN12_12140, E1948_03180, EP54_02240, EQ90_01125, QU38_03565, rpsI
Sequence domains: Ribosomal protein S9/S16
30S ribosomal protein S10 Chain: 1
Molecule details ›
Chain: 1
Length: 80 amino acids
Theoretical weight: 9.24 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
Small ribosomal subunit protein uS11 Chain: 2
Molecule details ›
Chain: 2
Length: 114 amino acids
Theoretical weight: 12.05 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077UKD6 (Residues: 15-128; Coverage: 88%)
Gene names: CD116_01925, ERS140147_00613, NCTC13712_02173, rpsK
Sequence domains: Ribosomal protein S11
Small ribosomal subunit protein uS12 Chain: 3
Molecule details ›
Chain: 3
Length: 136 amino acids
Theoretical weight: 15.19 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: W8U1C6 (Residues: 2-137; Coverage: 99%)
Gene names: CD116_12320, ERS140147_01023, NCTC13712_00498, rpsL
Sequence domains: Ribosomal protein S12/S23
Small ribosomal subunit protein uS14 Chain: 5
Molecule details ›
Chain: 5
Length: 60 amino acids
Theoretical weight: 7.19 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077UGW7 (Residues: 2-61; Coverage: 98%)
Gene names: CD116_01865, ERS140147_00625, NCTC13712_02185, rpsN, rpsN1, rpsN_1, rpsZ
Sequence domains: Ribosomal protein S14p/S29e
30S ribosomal protein S16 Chain: 7
Molecule details ›
Chain: 7
Length: 83 amino acids
Theoretical weight: 9.29 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
Small ribosomal subunit protein uS17 Chain: 8
Molecule details ›
Chain: 8
Length: 80 amino acids
Theoretical weight: 9.37 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077VLD5 (Residues: 5-84; Coverage: 92%)
Gene names: CD116_01845, ERS140147_00629, NCTC13712_02189, rpsQ
Sequence domains: Ribosomal protein S17
Small ribosomal subunit protein bS18 Chain: 9
Molecule details ›
Chain: 9
Length: 56 amino acids
Theoretical weight: 6.57 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077UZF4 (Residues: 22-77; Coverage: 70%)
Gene names: CD116_05340, ERS140147_02569, NCTC13712_00314, rpsR
Sequence domains: Ribosomal protein S18
Small ribosomal subunit protein uS19 Chain: I
Molecule details ›
Chain: I
Length: 78 amino acids
Theoretical weight: 9.01 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077V0P8 (Residues: 4-81; Coverage: 85%)
Gene names: CD116_01820, ERS140147_00634, NCTC13712_02194, rpsS
Sequence domains: Ribosomal protein S19
Large ribosomal subunit protein uL3 Chain: e
Molecule details ›
Chain: e
Length: 215 amino acids
Theoretical weight: 23.2 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: W8U3W0 (Residues: 2-216; Coverage: 98%)
Gene names: CD116_01800, ERS140147_00638, NCTC13712_02198, rplC
Sequence domains: Ribosomal protein L3
Large ribosomal subunit protein uL13 Chain: M
Molecule details ›
Chain: M
Length: 145 amino acids
Theoretical weight: 16.36 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: W8TUE6 (Residues: 1-145; Coverage: 100%)
Gene names: CD116_01960, ERS140147_00605, NCTC13712_02165, rplM
Sequence domains: Ribosomal protein L13
Large ribosomal subunit protein uL14 Chain: N
Molecule details ›
Chain: N
Length: 122 amino acids
Theoretical weight: 13.16 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077UUA0 (Residues: 1-122; Coverage: 100%)
Gene names: CD116_01850, ERS140147_00628, NCTC13712_02188, rplN
Sequence domains: Ribosomal protein L14p/L23e
Large ribosomal subunit protein uL15 Chain: O
Molecule details ›
Chain: O
Length: 145 amino acids
Theoretical weight: 15.52 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077UGA7 (Residues: 1-145; Coverage: 99%)
Gene names: CD116_01895, ERS140147_00619, NCTC13712_02179, rplO
Sequence domains: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Large ribosomal subunit protein uL16 Chain: P
Molecule details ›
Chain: P
Length: 136 amino acids
Theoretical weight: 15.49 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077V4G0 (Residues: 1-136; Coverage: 94%)
Gene names: CD116_01835, ERS140147_00631, NCTC13712_02191, rplP
Sequence domains: Ribosomal protein L16p/L10e
Large ribosomal subunit protein bL17 Chain: Q
Molecule details ›
Chain: Q
Length: 119 amino acids
Theoretical weight: 13.42 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077UG91 (Residues: 4-122; Coverage: 98%)
Gene names: CD116_01935, ERS140147_00611, NCTC13712_02171, rplQ
Sequence domains: Ribosomal protein L17
50S ribosomal protein L18 Chain: R
Molecule details ›
Chain: R
Length: 113 amino acids
Theoretical weight: 12.46 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
Large ribosomal subunit protein bL20 Chain: S
Molecule details ›
Chain: S
Length: 116 amino acids
Theoretical weight: 13.46 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077VMP6 (Residues: 2-117; Coverage: 98%)
Gene names: CD116_08935, ERS140147_00901, NCTC13712_01667, rplT
Sequence domains: Ribosomal protein L20
50S ribosomal protein L22 Chain: V
Molecule details ›
Chain: V
Length: 112 amino acids
Theoretical weight: 12.33 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
50S ribosomal protein L25 Chain: a
Molecule details ›
Chain: a
Length: 93 amino acids
Theoretical weight: 10.39 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
Large ribosomal subunit protein bL27 Chain: b
Molecule details ›
Chain: b
Length: 82 amino acids
Theoretical weight: 8.91 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077ULC5 (Residues: 12-93; Coverage: 87%)
Gene names: CD116_08800, ERS140147_00927, NCTC13712_01641, rpmA
Sequence domains: Ribosomal L27 protein
Large ribosomal subunit protein bL28 Chain: c
Molecule details ›
Chain: c
Length: 49 amino acids
Theoretical weight: 5.5 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077URJ8 (Residues: 12-60; Coverage: 79%)
Gene names: CD116_12910, ERS140147_00162, NCTC13712_01169, rpmB
Sequence domains: Ribosomal L28 family
Large ribosomal subunit protein uL29 Chain: d
Molecule details ›
Chain: d
Length: 62 amino acids
Theoretical weight: 7.33 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077W1J5 (Residues: 5-66; Coverage: 90%)
Gene names: CD116_01840, ERS140147_00630, NCTC13712_02190, rpmC
Sequence domains: Ribosomal L29 protein
50S ribosomalprotein L32p Chain: g
Molecule details ›
Chain: g
Length: 47 amino acids
Theoretical weight: 5.41 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
Large ribosomal subunit protein bL33 Chain: T
Molecule details ›
Chain: T
Length: 47 amino acids
Theoretical weight: 5.68 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077V2P0 (Residues: 2-48; Coverage: 96%)
Gene names: CD116_07290, ERS140147_01724, NCTC13712_01328, rpmG, rpmG2, rpmG2_1
Sequence domains: Ribosomal protein L33
Large ribosomal subunit protein bL34 Chain: i
Molecule details ›
Chain: i
Length: 43 amino acids
Theoretical weight: 5.25 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: W8TQ59 (Residues: 2-44; Coverage: 96%)
Gene names: CD116_00205, ERS140147_01157, NCTC13712_02668, rpmH
Sequence domains: Ribosomal protein L34
50S ribosomal protein L35 Chain: j
Molecule details ›
Chain: j
Length: 60 amino acids
Theoretical weight: 6.99 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
Large ribosomal subunit protein bL36 Chain: k
Molecule details ›
Chain: k
Length: 37 amino acids
Theoretical weight: 4.32 KDa
Source organism: Staphylococcus aureus
Expression system: Staphylococcus aureus
UniProt:
  • Canonical: A0A077UGV8 (Residues: 1-37; Coverage: 100%)
Gene names: CD116_01915, ERS140147_00615, NCTC13712_02175, rpmJ
Sequence domains: Ribosomal protein L36
5S Chain: C
Molecule details ›
Chain: C
Length: 114 nucleotides
Theoretical weight: 36.69 KDa
Sequence domains: 5S ribosomal RNA
16S Chain: X
Molecule details ›
Chain: X
Length: 1415 nucleotides
Theoretical weight: 458.19 KDa
Sequence domains: Bacterial small subunit ribosomal RNA
23S Chain: Y
Molecule details ›
Chain: Y
Length: 2720 nucleotides
Theoretical weight: 881.28 KDa
Sequence domains: Bacterial large subunit ribosomal RNA

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.11Å
Relevant EMDB volumes: EMD-11902
Expression system: Staphylococcus aureus