7cag

Electron Microscopy
3.78Å resolution

Mycobacterium smegmatis LpqY-SugABC complex in the catalytic intermediate state

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
PDBe Complex ID:
PDB-CPX-106430 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (5 distinct):
Bacterial extracellular solute-binding protein Chain: E
Molecule details ›
Chain: E
Length: 465 amino acids
Theoretical weight: 50.18 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis MC2 155
UniProt:
  • Canonical: A0R2C3 (Residues: 1-465; Coverage: 100%)
Gene name: MSMEG_5061
Sequence domains: Bacterial extracellular solute-binding protein
ABC transmembrane type-1 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 305 amino acids
Theoretical weight: 32.74 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis MC2 155
UniProt:
  • Canonical: A0R2C2 (Residues: 1-305; Coverage: 100%)
Gene name: MSMEG_5060
Sequence domains: Binding-protein-dependent transport system inner membrane component
ABC transmembrane type-1 domain-containing protein Chain: B
Molecule details ›
Chain: B
Length: 278 amino acids
Theoretical weight: 29.84 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis MC2 155
UniProt:
  • Canonical: A0R2C1 (Residues: 1-278; Coverage: 100%)
Gene name: MSMEG_5059
Sequence domains: Binding-protein-dependent transport system inner membrane component
ABC transporter domain-containing protein Chains: C, D
Molecule details ›
Chains: C, D
Length: 406 amino acids
Theoretical weight: 43.7 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis MC2 155
UniProt:
  • Canonical: A0R2C0 (Residues: 1-406; Coverage: 100%)
Gene name: MSMEG_5058
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: GLC
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.78Å
Relevant EMDB volumes: EMD-30330
Expression system: Mycolicibacterium smegmatis MC2 155