› 7cn6

X-ray diffraction
1.6Å resolution

T4 phage spackle protein gp61.3

Released:
DOI: 10.2210/pdb7cn6/pdb
PDB entry 7cn6 coloured by chain, front view.
PDB entry 7cn6 coloured by chain, side view.
PDB entry 7cn6 coloured by chain, top view.
Source organism: Escherichia virus T4
Primary publication:
Structure and Function of the T4 Spackle Protein Gp61.3.
Kanamaru S, Uchida K, Nemoto M, Fraser A, Arisaka F, Leiman PG
OpenAccess logo Viruses 12 (2020)
PMID: 32987925

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153854 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Protein spackle Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 75 amino acids
Theoretical weight: 8.88 KDa
Source organism: Escherichia virus T4
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P39230 (Residues: 23-97; Coverage: 100%)
Gene names: 61.3, sp

Ligands and Environments

1 bound ligand:
Ligand CA 3 x CA
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID30B
Spacegroup: P21
Unit cell:
a: 30.376Å b: 46.921Å c: 75.277Å
α: 90° β: 93.082° γ: 90°
R-values:
R R work R free
0.181 0.179 0.228
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

1 review citation

Research Progress on Glycoprotein 5 of Porcine Reproductive and Respiratory Syndrome Virus.
Luo et al. (2023)
4 other articles

1 mention without citation

Structure and Function of the T4 Spackle Protein Gp61.3.
Kanamaru et al. (2020)