7e86

X-ray diffraction
2.9Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-209746 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Spike protein S1 Chain: C
Molecule details ›
Chain: C
Length: 195 amino acids
Theoretical weight: 21.91 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P0DTC2 (Residues: 333-526; Coverage: 15%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
BD-508 Fab Heavy Chain Chain: A
Molecule details ›
Chain: A
Length: 222 amino acids
Theoretical weight: 23.45 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
BD-508 Fab Light Chain Chain: B
Molecule details ›
Chain: B
Length: 215 amino acids
Theoretical weight: 23.43 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NFPSS BEAMLINE BL19U1
Spacegroup: C2221
Unit cell:
a: 82.413Å b: 148.699Å c: 147.767Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.201 0.196 0.255
Expression systems:
  • Trichoplusia ni
  • Homo sapiens