› 7eel

Electron Microscopy
3.26Å resolution

Cyanophage Pam1 capsid asymmetric unit

Released:
DOI: 10.2210/pdb7eel/pdb
PDB entry 7eel coloured by chain, front view.
PDB entry 7eel coloured by chain, side view.
PDB entry 7eel coloured by chain, top view.
Source organism: unidentified
Primary publication:
Structure and assembly pattern of a freshwater short-tailed cyanophage Pam1.
Zhang JT, Yang F, Du K, Li WF, Chen Y, Jiang YL, Li Q, Zhou CZ
Structure 30 240-251.e4 (2022)
PMID: 34727518
Related structures: EMD-31078

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
hetero 840-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-168211 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Major capsid proteins Chains: A, B, C, D, E, F, G
Molecule details ›
Chains: A, B, C, D, E, F, G
Length: 365 amino acids
Theoretical weight: 39.38 KDa
Source organism: unidentified
Cement (decoration) proteins Chains: H, I, J, K, L, M, N
Molecule details ›
Chains: H, I, J, K, L, M, N
Length: 140 amino acids
Theoretical weight: 13.83 KDa
Source organism: unidentified

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.26Å
Relevant EMDB volumes: EMD-31078

Quick links

Citations

5 citation in other articles

Comparative genomic analysis of five freshwater cyanophages and reference-guided metagenomic data mining.
Du et al. (2022)
4 more

1 mention without citation

Megataxonomy and global ecology of the virosphere.
Koonin et al. (2024)