› 7f30

X-ray diffraction
2Å resolution

Crystal structure of OxdB E85A in complex with Z-2- (3-bromophenyl) propanal oxime

Released:
DOI: 10.2210/pdb7f30/pdb
PDB entry 7f30 coloured by chain, front view.
PDB entry 7f30 coloured by chain, side view.
PDB entry 7f30 coloured by chain, top view.
Source organism: Bacillus sp. OxB-1
Primary publication:
Crystal structural analysis of aldoxime dehydratase from Bacillus sp. OxB-1: Importance of surface residues in optimization for crystallization.
Matsui D, Muraki N, Chen K, Mori T, Ingram AA, Oike K, Gröger H, Aono S, Asano Y
J Inorg Biochem 230 111770 (2022)
PMID: 35272237

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-551110 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Phenylacetaldoxime dehydratase Chain: A
Molecule details ›
Chain: A
Length: 364 amino acids
Theoretical weight: 41.67 KDa
Source organism: Bacillus sp. OxB-1
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P82604 (Residues: 1-351; Coverage: 100%)
Gene name: oxd
Sequence domains: Haem-containing dehydratase

Ligands and Environments

2 bound ligands:
Ligand HEM 1 x HEM
Ligand 0WQ 1 x 0WQ
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL44XU
Spacegroup: P21
Unit cell:
a: 49.922Å b: 64.685Å c: 52.563Å
α: 90° β: 90.49° γ: 90°
R-values:
R R work R free
0.186 0.184 0.217
Expression system: Escherichia coli BL21(DE3)

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