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Electron Microscopy
3.69Å resolution

S protein of SARS-CoV-2 in complex bound with P36-5D2 (state1)

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero nonamer (preferred)
PDBe Complex ID:
PDB-CPX-210177 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1298 amino acids
Theoretical weight: 143.57 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 1-1208; Coverage: 95%)
Gene names: 2, S
Sequence domains:
P36-5D2 heavy chain Chains: H, d, g
Molecule details ›
Chains: H, d, g
Length: 471 amino acids
Theoretical weight: 51.62 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
P36-5D2 light chain Chains: L, c, f
Molecule details ›
Chains: L, c, f
Length: 233 amino acids
Theoretical weight: 25.46 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.69Å
Relevant EMDB volumes: EMD-31503
Expression system: Homo sapiens