7fjn

Electron Microscopy
3.25Å resolution

Cryo-EM structure of South African (B.1.351) SARS-CoV-2 spike glycoprotein in complex with two T6 Fab

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero heptamer (preferred)
PDBe Complex ID:
PDB-CPX-238615 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Fibritin C-terminal domain-containing protein; Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1280 amino acids
Theoretical weight: 141.52 KDa
Source organisms: Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 16-1208; Coverage: 94%)
  • Canonical: M1E1E4 (Residues: 1-28; Coverage: 48%)
Gene names: 2, S
Sequence domains:
T6 heavy chain Chains: H, I
Molecule details ›
Chains: H, I
Length: 117 amino acids
Theoretical weight: 12.83 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
T6 light chain Chains: J, L
Molecule details ›
Chains: J, L
Length: 113 amino acids
Theoretical weight: 12.57 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.25Å
Relevant EMDB volumes: EMD-31624
Expression system: Homo sapiens