› 7k7j

X-ray diffraction
3Å resolution

EphB6 receptor ectodomain

Released:
DOI: 10.2210/pdb7k7j/pdb
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PDB entry 7k7j coloured by chain, front view.
PDB entry 7k7j coloured by chain, side view.
PDB entry 7k7j coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Structure of the EphB6 receptor ectodomain.
Mason EO, Goldgur Y, Robev D, Freywald A, Nikolov DB, Himanen JP
OpenAccess logo PLoS One 16 e0247335 (2021)
PMID: 33770085

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-279329 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (2 distinct):
Ephrin type-B receptor 6 Chain: A
Molecule details ›
Chain: A
Length: 547 amino acids
Theoretical weight: 58.44 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: O15197 (Residues: 33-176, 177-578; Coverage: 55%)
Gene name: EPHB6
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer
No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: P43212
Unit cell:
a: 105.31Å b: 105.31Å c: 188.724Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.237 0.235 0.288
Expression system: Homo sapiens

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Citations

2 review citations

Eph receptors and ephrins in cancer progression.
Pasquale EB. (2024)
1 more

2 mentions without citation

Structure of the EphB6 receptor ectodomain.
Mason et al. (2021)
1 more

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