› 7kmx

Electron Microscopy
3.2Å resolution

The capsid of Myoviridae Phage XM1

Released:
DOI: 10.2210/pdb7kmx/pdb
PDB entry 7kmx coloured by chain, front view.
PDB entry 7kmx coloured by chain, side view.
PDB entry 7kmx coloured by chain, top view.
Source organism: Vibrio phage XM1
Primary publication:
Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Wang Z, Fokine A, Guo X, Jiang W, Rossmann MG, Kuhn RJ, Luo ZH, Klose T
Biorxiv (2021)
Related structures: EMD-22931

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
hetero 840-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-105832 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Head decoration protein Chains: a, b, c, d, e, f, g
Molecule details ›
Chains: a, b, c, d, e, f, g
Length: 160 amino acids
Theoretical weight: 16.82 KDa
Source organism: Vibrio phage XM1
UniProt:
  • Canonical: A0A7D7FKF5 (Residues: 1-160; Coverage: 100%)
Major capsid protein Chains: A, B, C, D, E, F, G
Molecule details ›
Chains: A, B, C, D, E, F, G
Length: 324 amino acids
Theoretical weight: 35.51 KDa
Source organism: Vibrio phage XM1
UniProt:
  • Canonical: A0A7D7J3A3 (Residues: 1-324; Coverage: 100%)
Sequence domains: Major capsid protein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.2Å
Relevant EMDB volumes: EMD-22931

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