7muq

Electron Microscopy
4.6Å resolution

Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 1

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 205-mer (preferred)
PDBe Complex ID:
PDB-CPX-241216 (preferred)
Entry contents:
11 distinct polypeptide molecules
Macromolecules (11 distinct):
Type IVB secretion system protein DotG/IcmE Chains: AG, Ag, BG, Bg, CG, Cg, DG, Dg, EG, Eg, FG, Fg, GG, Gg, HG, Hg, IG, Ig, JG, Jg, KG, Kg, LG, Lg, MG, Mg, NG, OG, PG, VG, WG, XG, YG, ZG
Molecule details ›
Chains: AG, Ag, BG, Bg, CG, Cg, DG, Dg, EG, Eg, FG, Fg, GG, Gg, HG, Hg, IG, Ig, JG, Jg, KG, Kg, LG, Lg, MG, Mg, NG, OG, PG, VG, WG, XG, YG, ZG
Length: 1048 amino acids
Theoretical weight: 107.91 KDa
Source organism: Legionella pneumophila
Type IV secretion system protein DotC Chains: AC, BC, CC, DC, EC, FC, GC, HC, IC, JC, KC, LC, MC
Molecule details ›
Chains: AC, BC, CC, DC, EC, FC, GC, HC, IC, JC, KC, LC, MC
Length: 303 amino acids
Theoretical weight: 34.16 KDa
Source organism: Legionella pneumophila
IcmG protein Chains: AF, Af, BF, Bf, CF, Cf, DF, Df, EF, Ef, FF, Ff, GF, Gf, HF, Hf, IF, If, JF, Jf, KF, Kf, LF, Lf, MF, Mf, VF, WF, XF, YF, ZF
Type IVB secretion system lipoprotein DotD Chains: AD, Ad, BD, Bd, CD, Cd, DD, Dd, ED, Ed, FD, Fd, GD, Gd, HD, Hd, ID, Id, JD, Jd, KD, Kd, LD, Ld, MD, Md
Type IV secretion protein IcmK Chains: AH, BH, CH, DH, EH, FH, GH, HH, IH, JH, KH, LH, MH, VH, WH, XH, YH, ZH
OmpA-like domain-containing protein Chains: AK, BK, CK, DK, EK, FK, GK, HK, IK, JK, KK, LK, MK
OmpA-like domain-containing protein Chains: AL, BL, CL, DL, EL, FL, GL, HL, IL, JL, KL, LL, ML
DUF2807 domain-containing protein Chains: AM, BM, CM, DM, EM, FM, GM, HM, IM, JM, KM, LM, MM
Neurogenic locus notch Chains: AN, BN, CN, DN, EN, FN, GN, HN, IN, JN, KN, LN, MN
Unknown protein fragment Chains: AU, BU, CU, DU, EU, FU, GU, HU, IU, JU, KU, LU, MU
Unknown protein fragment Chains: AX, BX, CX, DX, EX, FX, GX, HX, IX, JX, KX, LX, MX, VX, WX, XX, YX, ZX

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.6Å
Relevant EMDB volumes: EMD-24018