7njq

Electron Microscopy
2.67Å resolution

Mycobacterium smegmatis ATP synthase state 3a

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero icosamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-106418 (preferred)
Entry contents:
8 distinct polypeptide molecules
Macromolecules (8 distinct):
ATP synthase subunit alpha Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 548 amino acids
Theoretical weight: 58.95 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis
UniProt:
  • Canonical: A0R202 (Residues: 1-548; Coverage: 100%)
Gene names: MSMEG_4938, MSMEI_4811, atpA
Sequence domains:
ATP synthase subunit beta Chains: D, E, F
Molecule details ›
Chains: D, E, F
Length: 475 amino acids
Theoretical weight: 51.67 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis
UniProt:
  • Canonical: A0R200 (Residues: 1-475; Coverage: 100%)
Gene names: MSMEG_4936, MSMEI_4809, atpD
Sequence domains:
ATP synthase gamma chain Chain: G
Molecule details ›
Chain: G
Length: 307 amino acids
Theoretical weight: 33.44 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis
UniProt:
  • Canonical: A0R201 (Residues: 1-307; Coverage: 100%)
Gene names: MSMEG_4937, MSMEI_4810, atpG
Sequence domains: ATP synthase
ATP synthase epsilon chain Chain: H
Molecule details ›
Chain: H
Length: 121 amino acids
Theoretical weight: 13.28 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis
UniProt:
  • Canonical: A0R1Z9 (Residues: 1-121; Coverage: 100%)
Gene names: MSMEG_4935, MSMEI_4808, atpC
Sequence domains: ATP synthase, Delta/Epsilon chain, beta-sandwich domain
ATP synthase subunit c Chains: L, M, N, O, P, Q, R, S, T
Molecule details ›
Chains: L, M, N, O, P, Q, R, S, T
Length: 86 amino acids
Theoretical weight: 8.6 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis
UniProt:
  • Canonical: A0R205 (Residues: 1-86; Coverage: 100%)
Gene names: MSMEG_4941, atpE
Sequence domains: ATP synthase subunit C
ATP synthase subunit a Chain: a
Molecule details ›
Chain: a
Length: 252 amino acids
Theoretical weight: 27.57 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis
UniProt:
  • Canonical: A0R206 (Residues: 1-252; Coverage: 100%)
Gene names: MSMEG_4942, atpB
Sequence domains: ATP synthase A chain
ATP synthase subunit b Chain: b
Molecule details ›
Chain: b
Length: 180 amino acids
Theoretical weight: 19.02 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis
UniProt:
  • Canonical: A0R204 (Residues: 1-170; Coverage: 100%)
Gene names: MSMEG_4940, MSMEI_4813, atpF
Sequence domains: ATP synthase B/B' CF(0)
ATP synthase subunit b-delta Chain: d
Molecule details ›
Chain: d
Length: 445 amino acids
Theoretical weight: 47.5 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
Expression system: Mycolicibacterium smegmatis
UniProt:
  • Canonical: A0R203 (Residues: 1-445; Coverage: 100%)
Gene names: MSMEG_4939, MSMEI_4812, atpF, atpFH, atpH
Sequence domains:

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.67Å
Relevant EMDB volumes: EMD-12407
Expression system: Mycolicibacterium smegmatis