7oo3

Electron Microscopy
2.8Å resolution

Pol II-CSB-CSA-DDB1-UVSSA (Structure1)

Released:
Source organisms:
Primary publication:
Structural basis of human transcription-DNA repair coupling.
OpenAccess logo Nature 598 368-372 (2021)
PMID: 34526721
Related structures: EMD-13004

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero icosamer (preferred)
PDBe Complex ID:
PDB-CPX-236758 (preferred)
Entry contents:
17 distinct polypeptide molecules
2 distinct DNA molecules
1 distinct RNA molecule
Macromolecules (20 distinct):
DNA-directed RNA polymerase II subunit RPB1 Chain: A
DNA-directed RNA polymerase subunit beta Chain: B
Molecule details ›
Chain: B
Length: 1174 amino acids
Theoretical weight: 134.04 KDa
Source organism: Sus scrofa
UniProt:
  • Canonical: I3LGP4 (Residues: 127-1300; Coverage: 90%)
Gene name: POLR2B
Sequence domains:
DNA-directed RNA polymerase RpoA/D/Rpb3-type domain-containing protein Chain: C
RNA polymerase Rpb4/RPC9 core domain-containing protein Chain: D
DNA-directed RNA polymerase II subunit E Chain: E
DNA-directed RNA polymerases I, II, and III subunit RPABC2 Chain: F
DNA-directed RNA polymerase II subunit RPB7 Chain: G
DNA-directed RNA polymerases I, II, and III subunit RPABC3 Chain: H
DNA-directed RNA polymerase II subunit RPB9 Chain: I
DNA-directed RNA polymerases I, II, and III subunit RPABC5 Chain: J
DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein Chain: K
RNA polymerase II, I and III subunit K Chain: L
DNA excision repair protein ERCC-8 Chain: a
DNA excision repair protein ERCC-6 Chain: b
CSB element Chain: x
UV-stimulated scaffold protein A Chain: c
DNA damage-binding protein 1 Chain: d
NTS Chain: N
TS Chain: T
RNA Chain: P

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this EM entry.
Resolution: 2.8Å
Relevant EMDB volumes: EMD-13004
Expression system: Trichoplusia ni