7po5

Electron Microscopy
3.9Å resolution

Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 47C9 antibody Fab fragment

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero nonamer (preferred)
PDBe Complex ID:
PDB-CPX-225617 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
47C9 antibody heavy chain Chains: H, X, Z
Molecule details ›
Chains: H, X, Z
Length: 124 amino acids
Theoretical weight: 13.52 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
47C9 antibody light chain Chains: D, F, L
Molecule details ›
Chains: D, F, L
Length: 107 amino acids
Theoretical weight: 11.45 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1322 amino acids
Theoretical weight: 146.74 KDa
Source organism: Human coronavirus OC43
Expression system: Homo sapiens
UniProt:
  • Canonical: P36334 (Residues: 14-1263; Coverage: 93%)
Gene names: 3, S
Sequence domains:

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.9Å
Relevant EMDB volumes: EMD-13563
Expression system: Homo sapiens