› 7pr5

X-ray diffraction
1.94Å resolution

Cocrystal of an RSL-N23H and sulfonato-thiacalix[4]arene - zinc complex

Released:
DOI: 10.2210/pdb7pr5/pdb
PDB entry 7pr5 coloured by chain, front view.
PDB entry 7pr5 coloured by chain, side view.
PDB entry 7pr5 coloured by chain, top view.
Source organism: Ralstonia solanacearum
Primary publication:
Protein Frameworks with Thiacalixarene and Zinc.
Flood RJ, Ramberg KO, Mengel DB, Guagnini F, Crowley PB
OpenAccess logo Cryst Growth Des 22 3271-3276 (2022)
PMID: 35529063

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-102700 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative fucose-binding lectin protein Chains: A, B, C, D, E, F, G, H, I, J, K, L
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L
Length: 90 amino acids
Theoretical weight: 9.76 KDa
Source organism: Ralstonia solanacearum
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A0S4TLR1 (Residues: 2-91; Coverage: 99%)
Gene names: E7Z57_08365, HF909_06975, LBW55_09125, RUN39_v1_50103
Sequence domains: Fungal fucose-specific lectin

Ligands and Environments

4 bound ligands:
Ligand BDF 23 x BDF
Ligand ZN 7 x ZN
Ligand GOL 1 x GOL
Ligand 80M 1 x 80M
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SOLEIL BEAMLINE PROXIMA 2
Spacegroup: P212121
Unit cell:
a: 67.37Å b: 129.4Å c: 130.33Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.185 0.183 0.225
Expression system: Escherichia coli

Quick links

Citations

1 citations in other articles

Synthesis, Structure, and Characterization of Thiacalix[4]-2,8-thianthrene.
Ueda et al. (2023)

2 mentions without citation

Protein-Calixarene Complexation: From Recognition to Assembly.
Crowley PB. (2022)
1 more