› 7q2q

Electron Microscopy
4.3Å resolution

cryo iDPC-STEM structure recorded with CSA 3.5

Released:
DOI: 10.2210/pdb7q2q/pdb
PDB entry 7q2q coloured by chain, front view.
PDB entry 7q2q coloured by chain, side view.
PDB entry 7q2q coloured by chain, top view.
Source organism: Tobacco mosaic virus (vulgare)
Primary publication:
Single-particle cryo-EM structures from iDPC-STEM at near-atomic resolution.
Lazić I, Wirix M, Leidl ML, de Haas F, Mann D, Beckers M, Pechnikova EV, Müller-Caspary K, Egoavil R, Bosch EGT, Sachse C
OpenAccess logo Nat Methods (2022)
PMID: 36064775
Related structures: EMD-13780

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 98-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159636 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct RNA molecule
Macromolecules (2 distinct):
Capsid protein Chain: A
Molecule details ›
Chain: A
Length: 153 amino acids
Theoretical weight: 17.09 KDa
Source organism: Tobacco mosaic virus (vulgare)
UniProt:
  • Canonical: P69687 (Residues: 2-154; Coverage: 96%)
Gene name: CP
Sequence domains: Virus coat protein (TMV like)
RNA (5'-R(P*GP*AP*A)-3') Chain: B
Molecule details ›
Chain: B
Length: 3 nucleotides
Theoretical weight: 959 Da
Source organism: Tobacco mosaic virus (vulgare)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.3Å
Relevant EMDB volumes: EMD-13780

Quick links

Citations

4 review citations

Bringing Structure to Cell Biology with Cryo-Electron Tomography.
Young et al. (2023)
3 more