› 7qay

X-ray diffraction
2.09Å resolution

Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, Y55F mutant

Released:
DOI: 10.2210/pdb7qay/pdb
PDB entry 7qay coloured by chain, front view.
PDB entry 7qay coloured by chain, side view.
PDB entry 7qay coloured by chain, top view.
Source organism: Parcubacteria bacterium RAAC4_OD1_1
Primary publication:
Active site remodelling of a cyclodipeptide synthase redefines substrate scope.
Sutherland E, Harding CJ, Czekster CM
OpenAccess logo Commun Chem 5 101 (2022)
PMID: 36518199

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-197683 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cyclodipeptide synthase Chain: A
Molecule details ›
Chain: A
Length: 236 amino acids
Theoretical weight: 28.15 KDa
Source organism: Parcubacteria bacterium RAAC4_OD1_1
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: V7PYQ5 (Residues: 1-229; Coverage: 100%)
Gene name: O210_OD1C00001G0241
Sequence domains: Cyclodipeptide synthase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I24
Spacegroup: P42212
Unit cell:
a: 101.26Å b: 101.26Å c: 50.07Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.211 0.208 0.267
Expression system: Escherichia coli BL21(DE3)

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