7rdw

X-ray diffraction
3.55Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-219216 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (5 distinct):
Surface protein gp120 Chains: C, D, M, N
Molecule details ›
Chains: C, D, M, N
Length: 373 amino acids
Theoretical weight: 41.34 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:
  • Canonical: P04578 (Residues: 44-495; Coverage: 44%)
Gene name: env
Sequence domains: Envelope glycoprotein GP120
FH1 Fab Heavy Chain Chains: G, U
Molecule details ›
Chains: G, U
Length: 225 amino acids
Theoretical weight: 24.47 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
FH1 Fab Heavy Chain Chains: H, Q
Molecule details ›
Chains: H, Q
Length: 225 amino acids
Theoretical weight: 24.49 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
FH1 Fab Light Chain Chains: I, L, R, V
Molecule details ›
Chains: I, L, R, V
Length: 211 amino acids
Theoretical weight: 23.19 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 5.0.2
Spacegroup: P1
Unit cell:
a: 103.361Å b: 106.266Å c: 113.219Å
α: 67.566° β: 76.674° γ: 60.987°
R-values:
R R work R free
0.262 0.26 0.295
Expression system: Homo sapiens