7sbw

Electron Microscopy
3.2Å resolution

Structure of OC43 spike in complex with polyclonal Fab5 (Donor 1051)

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-100979 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (4 distinct):
Human polyclonal Fab model with polyalanine backbone - Heavy chain Chains: H, L
Molecule details ›
Chains: H, L
Length: 119 amino acids
Theoretical weight: 10.15 KDa
Source organism: Homo sapiens
Spike glycoprotein Chains: A, B, J
Molecule details ›
Chains: A, B, J
Length: 1367 amino acids
Theoretical weight: 151.12 KDa
Source organism: Human coronavirus OC43
Expression system: Homo sapiens
UniProt:
  • Canonical: A0A0B4N7I3 (Residues: 1-1287; Coverage: 95%)
Gene name: S
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.2Å
Relevant EMDB volumes: EMD-24990
Expression system: Homo sapiens