7thk

Electron Microscopy
3.11Å resolution

Cryo-EM structure of prefusion SARS-CoV-2 spike omicron B.1.1.529 variant

Released:
Primary publication:
Cryo-EM structure of the SARS-CoV-2 Omicron spike.
OpenAccess logo Cell Rep 38 110428 (2022)
PMID: 35172173
Related structures: EMD-25896

Function and Biology Details

Structure analysis Details

Assembly composition:
homo trimer (preferred)
PDBe Complex ID:
PDB-CPX-144650 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1254 amino acids
Theoretical weight: 139.47 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 1-210, 211-1205; Coverage: 94%)
Gene names: 2, S
Sequence domains:

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.11Å
Relevant EMDB volumes: EMD-25896
Expression system: Homo sapiens