7tqu

Electron Microscopy
3.8Å resolution

Coxsackievirus A21 capsid subdomain in complex with mouse polyclonal antibody pAbC-1

Released:

Function and Biology Details

Reactions catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Selective cleavage of Gln-|-Gly bond in the poliovirus polyprotein. In other picornavirus reactions Glu may be substituted for Gln, and Ser or Thr for Gly.
Selective cleavage of Tyr-|-Gly bond in picornavirus polyprotein.
NTP + H(2)O = NDP + phosphate
Biochemical function:
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
hetero tetradecamer (preferred)
PDBe Complex ID:
PDB-CPX-222275 (preferred)
Entry contents:
6 distinct polypeptide molecules
Macromolecules (6 distinct):
pAbC-1 heavy chain Chain: H
Molecule details ›
Chain: H
Length: 112 amino acids
Theoretical weight: 9.55 KDa
Source organism: Mus musculus
pAbC-1 light chain Chain: L
Molecule details ›
Chain: L
Length: 102 amino acids
Theoretical weight: 8.7 KDa
Source organism: Mus musculus
VP1 Chains: a, e, i
Molecule details ›
Chains: a, e, i
Length: 298 amino acids
Theoretical weight: 33.23 KDa
Source organism: Coxsackievirus A21
UniProt:
  • Canonical: Q7T7N6 (Residues: 582-879; Coverage: 14%)
Sequence domains: picornavirus capsid protein
Capsid protein VP2 Chains: b, f, j
Molecule details ›
Chains: b, f, j
Length: 272 amino acids
Theoretical weight: 29.92 KDa
Source organism: Coxsackievirus A21
UniProt:
  • Canonical: P22055 (Residues: 70-341; Coverage: 12%)
Sequence domains: picornavirus capsid protein
Capsid protein VP3 Chains: c, g, k
Molecule details ›
Chains: c, g, k
Length: 240 amino acids
Theoretical weight: 26.6 KDa
Source organism: Coxsackievirus A21
UniProt:
  • Canonical: P22055 (Residues: 342-581; Coverage: 11%)
Sequence domains: picornavirus capsid protein
Capsid protein VP4 Chains: d, h, l
Molecule details ›
Chains: d, h, l
Length: 69 amino acids
Theoretical weight: 7.44 KDa
Source organism: Coxsackievirus A21
UniProt:
  • Canonical: P22055 (Residues: 1-69; Coverage: 3%)
Sequence domains: Picornavirus coat protein (VP4)

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.8Å
Relevant EMDB volumes: EMD-26072