Function and Biology

BamABCDE bound to substrate EspP class 3

Source organisms:
Biochemical function: protein binding
Biological process: protein insertion into membrane
Cellular component: Bam protein complex

Sequence families

Pfam Protein families (Pfam)
PF01011
Domain description: PQQ enzyme repeat
Occurring in:
  1. Outer membrane protein assembly factor BamB
The deposited structure of PDB entry 7tt2 contains 5 copies of Pfam domain PF01011 (PQQ enzyme repeat) in Outer membrane protein assembly factor BamB. Showing 5 copies in chain D [auth B].

PF07244
Domain description: Surface antigen variable number repeat
Occurring in:
  1. Outer membrane protein assembly factor BamA
The deposited structure of PDB entry 7tt2 contains 4 copies of Pfam domain PF07244 (Surface antigen variable number repeat) in Outer membrane protein assembly factor BamA. Showing 4 copies in chain E [auth A] (some of the copies are out of the observed residue ranges!).

PF03797
Domain description: Autotransporter beta-domain
Occurring in:
  1. Autotransporter protein EspP translocator; Maltose/maltodextrin-binding periplasmic protein
The deposited structure of PDB entry 7tt2 contains 1 copy of Pfam domain PF03797 (Autotransporter beta-domain) in Autotransporter protein EspP translocator. Showing 1 copy in chain F [auth P].

PF01547
Domain description: Bacterial extracellular solute-binding protein
Occurring in:
  1. Autotransporter protein EspP translocator; Maltose/maltodextrin-binding periplasmic protein
The deposited structure of PDB entry 7tt2 contains 1 copy of Pfam domain PF01547 (Bacterial extracellular solute-binding protein) in Autotransporter protein EspP translocator. Showing 1 copy in chain F [auth P] (this domain is out of the observed residue ranges!).

PF04355
Domain description: SmpA / OmlA family
Occurring in:
  1. Outer membrane protein assembly factor BamE
The deposited structure of PDB entry 7tt2 contains 1 copy of Pfam domain PF04355 (SmpA / OmlA family) in Outer membrane protein assembly factor BamE. Showing 1 copy in chain C [auth E].

PF13525
Domain description: Outer membrane lipoprotein
Occurring in:
  1. Outer membrane protein assembly factor BamD
The deposited structure of PDB entry 7tt2 contains 1 copy of Pfam domain PF13525 (Outer membrane lipoprotein) in Outer membrane protein assembly factor BamD. Showing 1 copy in chain A [auth D].

PF06804
Domain description: NlpB/DapX lipoprotein
Occurring in:
  1. Outer membrane protein assembly factor BamC
The deposited structure of PDB entry 7tt2 contains 1 copy of Pfam domain PF06804 (NlpB/DapX lipoprotein) in Outer membrane protein assembly factor BamC. Showing 1 copy in chain B [auth C].

PF13360
Domain description: PQQ-like domain
Occurring in:
  1. Outer membrane protein assembly factor BamB
The deposited structure of PDB entry 7tt2 contains 1 copy of Pfam domain PF13360 (PQQ-like domain) in Outer membrane protein assembly factor BamB. Showing 1 copy in chain D [auth B].

PF01103
Domain description: Omp85 superfamily domain
Occurring in:
  1. Outer membrane protein assembly factor BamA
The deposited structure of PDB entry 7tt2 contains 1 copy of Pfam domain PF01103 (Omp85 superfamily domain) in Outer membrane protein assembly factor BamA. Showing 1 copy in chain E [auth A].

InterPro InterPro annotations
IPR006060
Domain description: Maltose/Cyclodextrin ABC transporter, substrate-binding protein
Occurring in:
  1. Autotransporter protein EspP translocator; Maltose/maltodextrin-binding periplasmic protein
IPR018391
Domain description: Pyrrolo-quinoline quinone beta-propeller repeat
Occurring in:
  1. Outer membrane protein assembly factor BamB
IPR034746
Domain description: POTRA domain
Occurring in:
  1. Outer membrane protein assembly factor BamA
IPR010827
Domain description: POTRA domain, BamA/TamA-like
Occurring in:
  1. Outer membrane protein assembly factor BamA
IPR005546
Domain description: Autotransporter beta-domain
Occurring in:
  1. Autotransporter protein EspP translocator; Maltose/maltodextrin-binding periplasmic protein
IPR017689
Domain description: Outer membrane protein assembly factor BamD
Occurring in:
  1. Outer membrane protein assembly factor BamD
IPR023707
Domain description: Outer membrane protein assembly factor BamA
Occurring in:
  1. Outer membrane protein assembly factor BamA
IPR036709
Domain description: Autotransporter beta-domain superfamily
Occurring in:
  1. Autotransporter protein EspP translocator; Maltose/maltodextrin-binding periplasmic protein
IPR026592
Domain description: Outer membrane protein assembly factor BamE
Occurring in:
  1. Outer membrane protein assembly factor BamE
IPR011990
Domain description: Tetratricopeptide-like helical domain superfamily
Occurring in:
  1. Outer membrane protein assembly factor BamD
IPR017687
Domain description: Outer membrane protein assembly factor BamB
Occurring in:
  1. Outer membrane protein assembly factor BamB
IPR006315
Domain description: Outer membrane autotransporter barrel domain
Occurring in:
  1. Autotransporter protein EspP translocator; Maltose/maltodextrin-binding periplasmic protein
IPR006061
Domain description: Solute-binding family 1, conserved site
Occurring in:
  1. Autotransporter protein EspP translocator; Maltose/maltodextrin-binding periplasmic protein
IPR006059
Domain description: Bacterial-type extracellular solute-binding protein
Occurring in:
  1. Autotransporter protein EspP translocator; Maltose/maltodextrin-binding periplasmic protein
IPR007450
Domain description: Outer membrane protein assembly factor BamE domain
Occurring in:
  1. Outer membrane protein assembly factor BamE
IPR037873
Domain description: BamE-like
Occurring in:
  1. Outer membrane protein assembly factor BamE
IPR039565
Domain description: Outer membrane lipoprotein BamD-like
Occurring in:
  1. Outer membrane protein assembly factor BamD
IPR042268
Domain description: Outer membrane protein assembly factor BamC, C-terminal
Occurring in:
  1. Outer membrane protein assembly factor BamC
IPR010653
Domain description: NlpB/DapX lipoprotein
Occurring in:
  1. Outer membrane protein assembly factor BamC
IPR014524
Domain description: Outer membrane protein assembly factor BamC
Occurring in:
  1. Outer membrane protein assembly factor BamC
IPR002372
Domain description: Pyrrolo-quinoline quinone repeat
Occurring in:
  1. Outer membrane protein assembly factor BamB
IPR011047
Domain description: Quinoprotein alcohol dehydrogenase-like superfamily
Occurring in:
  1. Outer membrane protein assembly factor BamB
IPR015943
Domain description: WD40/YVTN repeat-like-containing domain superfamily
Occurring in:
  1. Outer membrane protein assembly factor BamB
IPR000184
Domain description: Bacterial surface antigen (D15)
Occurring in:
  1. Outer membrane protein assembly factor BamA
IPR039910
Domain description: Surface antigen D15-like
Occurring in:
  1. Outer membrane protein assembly factor BamA