7u8t

X-ray diffraction
3Å resolution

Vps13 adaptor binding domain in complex with Mcp1 PxP motif peptide

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
PDBe Complex ID:
PDB-CPX-123951 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Intermembrane lipid transfer protein VPS13; Mitochondrial adapter protein MCP1 transmembrane domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 717 amino acids
Theoretical weight: 81.81 KDa
Source organism: Thermochaetoides thermophila DSM 1495
Expression system: Escherichia coli
UniProt:
  • Canonical: G0S0T5 (Residues: 15-32; Coverage: 6%)
  • Canonical: G0S3B8 (Residues: 1944-2635; Coverage: 22%)
Gene names: CTHT_0011170, CTHT_0020450, VPS13
Sequence domains: Vacuolar-sorting associated protein 13, adaptor binding domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: P21
Unit cell:
a: 83.735Å b: 91.225Å c: 132.769Å
α: 90° β: 102.16° γ: 90°
R-values:
R R work R free
0.251 0.25 0.285
Expression system: Escherichia coli