7vat

Electron Microscopy
3.2Å resolution

V1EG of V/A-ATPase from Thermus thermophilus at low ATP concentration, state2-1

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dodecamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-131512 (preferred)
Entry contents:
6 distinct polypeptide molecules
Macromolecules (6 distinct):
V-type ATP synthase alpha chain Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 578 amino acids
Theoretical weight: 63.67 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q56403 (Residues: 1-578; Coverage: 100%)
Gene names: TTHA1273, atpA
Sequence domains:
V-type ATP synthase beta chain Chains: D, E, F
Molecule details ›
Chains: D, E, F
Length: 478 amino acids
Theoretical weight: 53.22 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q56404 (Residues: 1-478; Coverage: 100%)
Gene names: TTHA1272, atpB
Sequence domains:
V-type ATP synthase subunit D Chain: G
Molecule details ›
Chain: G
Length: 223 amino acids
Theoretical weight: 24.72 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: O87880 (Residues: 1-223; Coverage: 100%)
Gene names: TTHA1271, atpD, vatD
Sequence domains: ATP synthase subunit D
V-type ATP synthase subunit F Chain: H
Molecule details ›
Chain: H
Length: 104 amino acids
Theoretical weight: 11.29 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P74903 (Residues: 1-104; Coverage: 100%)
Gene names: TTHA1274, atpF, vatF
Sequence domains: ATP synthase (F/14-kDa) subunit
V-type ATP synthase, subunit (VAPC-THERM) Chains: I, K
Molecule details ›
Chains: I, K
Length: 120 amino acids
Theoretical weight: 13.17 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SIT5 (Residues: 1-120; Coverage: 100%)
Gene name: TTHA1279
Sequence domains: Vacuolar (H+)-ATPase G subunit
V-type ATP synthase subunit E Chains: J, L
Molecule details ›
Chains: J, L
Length: 188 amino acids
Theoretical weight: 20.65 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P74901 (Residues: 1-188; Coverage: 100%)
Gene names: TTHA1276, atpE, vatE
Sequence domains: ATP synthase (E/31 kDa) subunit

Ligands and Environments

3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.2Å
Relevant EMDB volumes: EMD-31863