7vds

X-ray diffraction
3.05Å resolution

The structure of cyclin-dependent kinase 5 (CDK5) in complex with p25 and Compound 24

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-169443 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Cyclin-dependent kinase 5 Chains: A, B
Molecule details ›
Chains: A, B
Length: 292 amino acids
Theoretical weight: 33.31 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q00535 (Residues: 2-292; Coverage: 100%)
Gene names: CDK5, CDKN5, PSSALRE
Sequence domains: Protein kinase domain
Cyclin-dependent kinase 5 activator 1, p25 Chains: C, D
Molecule details ›
Chains: C, D
Length: 209 amino acids
Theoretical weight: 23.33 KDa
Source organism: Homo sapiens
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q15078 (Residues: 100-307; Coverage: 68%)
Gene names: CDK5R, CDK5R1, NCK5A
Sequence domains: Cyclin-dependent kinase 5 activator protein

Ligands and Environments

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-D
Spacegroup: P3221
Unit cell:
a: 118.06Å b: 118.06Å c: 153.69Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.228 0.225 0.272
Expression system: Spodoptera frugiperda