› 7vff

Electron Microscopy
4.1Å resolution

Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal 17 residue truncation

Released:
DOI: 10.2210/pdb7vff/pdb
PDB entry 7vff coloured by chain, front view.
PDB entry 7vff coloured by chain, side view.
PDB entry 7vff coloured by chain, top view.
Source organism: Vaccinia virus WR
Primary publication:
Assembly mechanism of the pleomorphic immature poxvirus scaffold.
Hyun J, Matsunami H, Kim TG, Wolf M
OpenAccess logo Nat Commun 13 1704 (2022)
PMID: 35361762
Related structures: EMD-31951

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159471 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Scaffold protein OPG125 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 531 amino acids
Theoretical weight: 59.82 KDa
Source organism: Vaccinia virus WR
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P68440 (Residues: 18-548; Coverage: 96%)
Gene names: D13L, OPG125, VACWR118
Sequence domains: Poxvirus rifampicin resistance protein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.1Å
Relevant EMDB volumes: EMD-31951
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

1 review citation

Poxvirus under the eyes of electron microscope.
Hyun J. (2022)
3 other articles