7w0q

X-ray diffraction
1.1Å resolution

TRIM7 in complex with C-terminal peptide of 2C

Released:
Model geometry
Fit model/data

Function and Biology Details

Reactions catalysed:
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Selective cleavage of Gln-|-Gly bond in the poliovirus polyprotein. In other picornavirus reactions Glu may be substituted for Gln, and Ser or Thr for Gly.
Selective cleavage of Tyr-|-Gly bond in picornavirus polyprotein.
NTP + H(2)O = NDP + phosphate
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-136770 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
E3 ubiquitin-protein ligase TRIM7 Chain: A
Molecule details ›
Chain: A
Length: 174 amino acids
Theoretical weight: 19.69 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9C029 (Residues: 338-511; Coverage: 34%)
Gene names: GNIP, RNF90, TRIM7
Sequence domains:
Protein 2C Chain: B
Molecule details ›
Chain: B
Length: 10 amino acids
Theoretical weight: 1.08 KDa
Source organism: Coxsackievirus
Expression system: Not provided
UniProt:
  • Canonical: P03313 (Residues: 1420-1429; Coverage: 1%)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: SSRF BEAMLINE BL18U1
Spacegroup: C2
Unit cell:
a: 70.486Å b: 53.178Å c: 46.744Å
α: 90° β: 91.437° γ: 90°
R-values:
R R work R free
0.187 0.186 0.211
Expression systems:
  • Escherichia coli
  • Not provided